FBD27_ARATH
ID FBD27_ARATH Reviewed; 418 AA.
AC Q9FJV2; F4K7Q0;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Putative FBD-associated F-box protein At5g56560;
GN OrderedLocusNames=At5g56560; ORFNames=MKN22.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SEQUENCE CAUTION:
CC Sequence=AED96781.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAB09873.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB013392; BAB09873.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AB019234; BAB09873.1; JOINED; Genomic_DNA.
DR EMBL; CP002688; AED96781.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; ANM70149.1; -; Genomic_DNA.
DR RefSeq; NP_001331780.1; NM_001345207.1.
DR RefSeq; NP_200467.2; NM_125039.2.
DR AlphaFoldDB; Q9FJV2; -.
DR PaxDb; Q9FJV2; -.
DR PRIDE; Q9FJV2; -.
DR EnsemblPlants; AT5G56560.2; AT5G56560.2; AT5G56560.
DR GeneID; 835757; -.
DR Gramene; AT5G56560.2; AT5G56560.2; AT5G56560.
DR KEGG; ath:AT5G56560; -.
DR Araport; AT5G56560; -.
DR InParanoid; Q9FJV2; -.
DR OMA; WINATIG; -.
DR OrthoDB; 686125at2759; -.
DR PRO; PR:Q9FJV2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJV2; differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..418
FT /note="Putative FBD-associated F-box protein At5g56560"
FT /id="PRO_0000283159"
FT DOMAIN 4..60
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT DOMAIN 340..390
FT /note="FBD"
SQ SEQUENCE 418 AA; 47638 MW; 654A4732E3B3DD03 CRC64;
MEKQTRLSDL PDELLLKILS ALPMFKVTLA TRLISRRWKG PWKLVPDVTF DDDDIPFKSF
ETFMSFVYGS FLSNDAQILD RLHLKLNQKY SASDINFWVQ VAVNRSVREL RIDLFGKTLE
LPCCLCSCIT LKELTLHDLC IKVVPAWFRL PSLKTLHLLS VKFSSDGFVA SILRICPVLE
RLVVDGTKGN VMITNIDVPT LRNLSIRNSK GKGTYVEGSK GFVIKAPSLT DLNFEDTLSN
FLMFEPMPEV IKADIQVICD QSKNFIGSLT SIQHLSLCSL TSKTPYPACT VFSSLKYLEL
CTCSARWANL FACILNAAPE LRSLKLKSKH KFNYNDPMTL WEEPAVVAKC LSEHLEIFEW
RQYEGTEQER NVAGYILANA TCLKMATFST RCRNRNHRML KKLKSMDRVS KACRLVFD