FBD37_ARATH
ID FBD37_ARATH Reviewed; 398 AA.
AC Q9FJU2; F4K924;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 10-AUG-2010, sequence version 2.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Putative FBD-associated F-box protein At5g56700;
GN OrderedLocusNames=At5g56700; ORFNames=MIK19.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9FJU2-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9FJU2-2; Sequence=VSP_042249;
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB09888.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAB09888.1; Type=Frameshift; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB013392; BAB09888.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; Q9FJU2; -.
DR PRIDE; Q9FJU2; -.
DR EnsemblPlants; AT5G56700.2; AT5G56700.2; AT5G56700.
DR Gramene; AT5G56700.2; AT5G56700.2; AT5G56700.
DR Araport; AT5G56700; -.
DR TAIR; locus:2165036; AT5G56700.
DR InParanoid; Q9FJU2; -.
DR PhylomeDB; Q9FJU2; -.
DR PRO; PR:Q9FJU2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJU2; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..398
FT /note="Putative FBD-associated F-box protein At5g56700"
FT /id="PRO_0000396024"
FT DOMAIN 1..47
FT /note="F-box"
FT DOMAIN 340..388
FT /note="FBD"
FT VAR_SEQ 29..88
FT /note="CLSKQWEFLWMWLSKLEFYFSDGSESACLRDFIAKNLPLHKAPIIESLRFCS
FT FFGSLQPK -> VCRNNGSFFGCGCPNSSSTLVM (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_042249"
SQ SEQUENCE 398 AA; 45842 MW; FF48C203B65DFCA1 CRC64;
MAKISDLSDE LLVKILSFLP TKEAVSTSCL SKQWEFLWMW LSKLEFYFSD GSESACLRDF
IAKNLPLHKA PIIESLRFCS FFGSLQPKDL KSWVRIAVSR CVRELSISLH DTTAAVSLPS
SLYTCKSLVT LKLYGKKVLL DVPRTVFLPS LKTLQLERLR YSDEDSLRLL LSYCPVLEDL
SIVREDYDNL RALVVIVPSL QRLSLEIPGN CSSDGYVIVT PSLKYFKVVD YRESMSYLIE
QMPELEEADI VVLQYPEKLL ESVTFFKRLS IRVIFNTYTE TVYRDGIVFN RLENLKLCIC
NGDWSKLLIQ FLKDSPNLRV LNLLVDDYPS SLGDYEPVRW KNNKSSVPKC LLESLETFEF
AGYIGTPEER DFLSYIFKHA RCLKSSSILS RPERYHGI
