FBK10_ARATH
ID FBK10_ARATH Reviewed; 433 AA.
AC P0DI02; Q0WR04; Q56X62; Q56XG9; Q7GAV1; Q8GRJ5; Q8RXU7; Q9FE36; Q9FXK3;
AC Q9FXK7;
DT 21-MAR-2012, integrated into UniProtKB/Swiss-Prot.
DT 21-MAR-2012, sequence version 1.
DT 03-AUG-2022, entry version 58.
DE RecName: Full=F-box/kelch-repeat protein At1g24800;
GN OrderedLocusNames=At1g24800; ORFNames=F5A9.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG03124.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g24793 and At1g24800.; Evidence={ECO:0000305};
CC Sequence=BAD95425.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC004133; AAG03124.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE30564.1; -; Genomic_DNA.
DR EMBL; AK118531; BAC43134.1; -; mRNA.
DR EMBL; AY080666; AAL86342.1; -; mRNA.
DR EMBL; AY150377; AAN12922.1; -; mRNA.
DR EMBL; BT010324; AAQ55275.1; -; mRNA.
DR EMBL; AK221705; BAD95425.1; ALT_INIT; mRNA.
DR EMBL; AK221721; BAD93716.1; -; mRNA.
DR EMBL; AK221815; BAD94008.1; -; mRNA.
DR EMBL; AK227908; BAE99878.1; -; mRNA.
DR EMBL; AK228522; BAF00445.1; -; mRNA.
DR EMBL; AK230082; BAF01902.1; -; mRNA.
DR EMBL; AK229710; BAF01548.1; -; mRNA.
DR EMBL; AK230005; BAF01829.1; -; mRNA.
DR PIR; B86380; B86380.
DR RefSeq; NP_001117347.1; NM_001123875.2.
DR RefSeq; NP_001117348.1; NM_001123876.1.
DR RefSeq; NP_001117350.1; NM_001123878.4.
DR RefSeq; NP_001117352.1; NM_001123880.1.
DR RefSeq; NP_001185091.1; NM_001198162.2.
DR RefSeq; NP_001319077.1; NM_001332666.1.
DR AlphaFoldDB; P0DI02; -.
DR PaxDb; P0DI02; -.
DR PRIDE; P0DI02; -.
DR EnsemblPlants; AT1G24800.1; AT1G24800.1; AT1G24800.
DR EnsemblPlants; AT1G24881.1; AT1G24881.1; AT1G24881.
DR EnsemblPlants; AT1G25055.1; AT1G25055.1; AT1G25055.
DR EnsemblPlants; AT1G25150.1; AT1G25150.1; AT1G25150.
DR EnsemblPlants; AT1G25150.2; AT1G25150.2; AT1G25150.
DR EnsemblPlants; AT1G25211.1; AT1G25211.1; AT1G25211.
DR GeneID; 10723103; -.
DR GeneID; 6240216; -.
DR GeneID; 6241002; -.
DR GeneID; 6241166; -.
DR GeneID; 6241255; -.
DR Gramene; AT1G24800.1; AT1G24800.1; AT1G24800.
DR Gramene; AT1G24881.1; AT1G24881.1; AT1G24881.
DR Gramene; AT1G25055.1; AT1G25055.1; AT1G25055.
DR Gramene; AT1G25150.1; AT1G25150.1; AT1G25150.
DR Gramene; AT1G25150.2; AT1G25150.2; AT1G25150.
DR Gramene; AT1G25211.1; AT1G25211.1; AT1G25211.
DR KEGG; ath:AT1G24800; -.
DR KEGG; ath:AT1G24881; -.
DR KEGG; ath:AT1G25055; -.
DR KEGG; ath:AT1G25150; -.
DR KEGG; ath:AT1G25211; -.
DR Araport; AT1G24800; -.
DR TAIR; locus:4515102583; AT1G24800.
DR HOGENOM; CLU_034692_0_0_1; -.
DR InParanoid; P0DI02; -.
DR OrthoDB; 634455at2759; -.
DR PhylomeDB; P0DI02; -.
DR PRO; PR:P0DI02; -.
DR Proteomes; UP000006548; Chromosome 1.
DR Genevisible; P0DI02; AT.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SUPFAM; SSF50965; SSF50965; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..433
FT /note="F-box/kelch-repeat protein At1g24800"
FT /id="PRO_0000274944"
FT DOMAIN 23..71
FT /note="F-box"
FT REPEAT 170..216
FT /note="Kelch 1"
FT REPEAT 286..337
FT /note="Kelch 2"
FT CONFLICT 38
FT /note="L -> I (in Ref. 5; BAF00445)"
FT /evidence="ECO:0000305"
FT CONFLICT 163
FT /note="G -> R (in Ref. 5; BAD95425)"
FT /evidence="ECO:0000305"
FT CONFLICT 371
FT /note="A -> T (in Ref. 5; BAD94008/BAF01548)"
FT /evidence="ECO:0000305"
FT CONFLICT 429
FT /note="K -> R (in Ref. 4; AAL86342)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 433 AA; 49644 MW; EE6FB95060482C85 CRC64;
MRRRRCDLQP KRTRMCDLQP KRTSMCDLPP KLVGEKILTR IPITSLRAVR STCKLWNALT
KDRVLGKAAA QFLGFMTMDS KVCSVRFHLR RSKEEEEDTM DLSIKQVDLL NQVEISRVYH
CDGLLLCVAK DNSRVVVWNP YLGQTRWIRP RTESNIGDSY ALGYDINRNH KILRMVQTRN
VSVYRYEIYD LRSNSWRVLE VTPNGEMDPN HPLYGVSVKG NTYFFAHEDS SSGEIDEDGD
IIDLEDFLLC FDFTTETFGL RLPLPFHSTI DATVTLSCVR DQQLAVLYHN EGLHSDDRFT
TVEFWVTTSI EPNSVSWSKF LTVDMRPLAL TGVRFDNDMG ATFFIDEDEK VAVVFDLDGY
LSTESARYHT AFISGKDGFF KPVTLGVAPN VGEPCPRTGH IPTTYRPPLV CSSTYLPSLV
QVNQQRKRKE RHV
