FBK17_ARATH
ID FBK17_ARATH Reviewed; 398 AA.
AC Q9C6Z0; Q9C8R2;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=F-box/kelch-repeat protein At1g30090;
GN OrderedLocusNames=At1g30090; ORFNames=T1P2.14, T2H7.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG52060.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AC022455; AAG52060.1; ALT_INIT; Genomic_DNA.
DR EMBL; AC074176; AAG50856.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31177.1; -; Genomic_DNA.
DR EMBL; AY057619; AAL14414.1; -; mRNA.
DR EMBL; BT002616; AAO11532.1; -; mRNA.
DR PIR; H86424; H86424.
DR RefSeq; NP_564347.1; NM_102748.2.
DR AlphaFoldDB; Q9C6Z0; -.
DR SMR; Q9C6Z0; -.
DR STRING; 3702.AT1G30090.1; -.
DR PaxDb; Q9C6Z0; -.
DR PRIDE; Q9C6Z0; -.
DR ProteomicsDB; 222553; -.
DR EnsemblPlants; AT1G30090.1; AT1G30090.1; AT1G30090.
DR GeneID; 839888; -.
DR Gramene; AT1G30090.1; AT1G30090.1; AT1G30090.
DR KEGG; ath:AT1G30090; -.
DR Araport; AT1G30090; -.
DR TAIR; locus:2198304; AT1G30090.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_044411_0_0_1; -.
DR InParanoid; Q9C6Z0; -.
DR OMA; WHPIANM; -.
DR OrthoDB; 813832at2759; -.
DR PhylomeDB; Q9C6Z0; -.
DR PRO; PR:Q9C6Z0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C6Z0; baseline and differential.
DR Genevisible; Q9C6Z0; AT.
DR GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR InterPro; IPR045887; SAGL1-like.
DR PANTHER; PTHR46344; PTHR46344; 1.
DR Pfam; PF01344; Kelch_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00612; Kelch; 2.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..398
FT /note="F-box/kelch-repeat protein At1g30090"
FT /id="PRO_0000283178"
FT DOMAIN 51..98
FT /note="F-box"
FT REPEAT 106..152
FT /note="Kelch 1"
FT REPEAT 159..207
FT /note="Kelch 2"
FT REPEAT 209..255
FT /note="Kelch 3"
FT REPEAT 257..304
FT /note="Kelch 4"
FT REPEAT 305..346
FT /note="Kelch 5"
SQ SEQUENCE 398 AA; 45152 MW; 02D1F3F920F45C7B CRC64;
MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD
VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE FGFKDPWLFV VGFSRCTGKI
QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY
DMVKNHWTVT NKMITARSFF ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN
MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL
AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
