FBK21_ARATH
ID FBK21_ARATH Reviewed; 478 AA.
AC Q9C8K7; Q681W1; Q8LAD5;
DT 17-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 109.
DE RecName: Full=F-box/kelch-repeat protein At1g51550;
GN OrderedLocusNames=At1g51550; ORFNames=F5D21.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clone.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 3-478.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD43187.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAD43269.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AC024261; AAG52632.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32682.1; -; Genomic_DNA.
DR EMBL; AY087885; AAM65437.1; -; mRNA.
DR EMBL; BT029162; ABJ17097.1; -; mRNA.
DR EMBL; AK175506; BAD43269.1; ALT_INIT; mRNA.
DR EMBL; AK175424; BAD43187.1; ALT_INIT; mRNA.
DR PIR; A96554; A96554.
DR RefSeq; NP_564592.1; NM_104033.6.
DR AlphaFoldDB; Q9C8K7; -.
DR SMR; Q9C8K7; -.
DR BioGRID; 26805; 9.
DR STRING; 3702.AT1G51550.1; -.
DR PaxDb; Q9C8K7; -.
DR PRIDE; Q9C8K7; -.
DR ProteomicsDB; 222421; -.
DR EnsemblPlants; AT1G51550.1; AT1G51550.1; AT1G51550.
DR GeneID; 841580; -.
DR Gramene; AT1G51550.1; AT1G51550.1; AT1G51550.
DR KEGG; ath:AT1G51550; -.
DR Araport; AT1G51550; -.
DR TAIR; locus:2033934; AT1G51550.
DR eggNOG; KOG0379; Eukaryota.
DR HOGENOM; CLU_030848_1_0_1; -.
DR InParanoid; Q9C8K7; -.
DR OMA; YRHRKND; -.
DR OrthoDB; 933937at2759; -.
DR PhylomeDB; Q9C8K7; -.
DR PRO; PR:Q9C8K7; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C8K7; baseline and differential.
DR Genevisible; Q9C8K7; AT.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0007623; P:circadian rhythm; IBA:GO_Central.
DR GO; GO:0009637; P:response to blue light; IBA:GO_Central.
DR Gene3D; 2.120.10.80; -; 2.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR Pfam; PF12937; F-box-like; 1.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..478
FT /note="F-box/kelch-repeat protein At1g51550"
FT /id="PRO_0000283181"
FT DOMAIN 18..64
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 135..187
FT /note="Kelch 1"
FT REPEAT 246..299
FT /note="Kelch 2"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 16
FT /note="Q -> R (in Ref. 3; AAM65437)"
FT /evidence="ECO:0000305"
FT CONFLICT 255
FT /note="L -> Q (in Ref. 3; AAM65437)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 478 AA; 53167 MW; BA62F920464236D3 CRC64;
MAAESTRNSS PPSTSQSSSP IINLPDDHLL TILLLLPVDS ILSFSMTCKR YKSLACSDSL
WEALCEREWG PTSVDALKLS SLRDGFSWML MFQRVYKMDS VCCHKISDPD DDDEESSSFP
IPRASHSLNF VNDHLVLFGG GCQGGRHLDD TWTSYVDKSN QSILKWKKVK SGTPSGRFGH
TCIVIGEYLL LFGGINDRGE RLNDTWIGQV FCHEGLSWKL LNVGSLQRPR PPPRGAHSAC
CIAEKKMVVH GGIGLNGVRL GDTWILELSE DFSSGTWHMV ESPQLPPPRS GHTLTCIREN
QVVLFGGRGL GYDVLDDVWI LDIQEPCEEK WIQIFYDFQD VPEYASLPRV GHSATLVLGG
RILIYGGEDS YRHRKDDFWV LDVKTIPSSG LKPQGLSLNG SSVWKKLDRI SYGPKSRSFH
RACADCSGRF LYVFGGMVDG LLQPAASSGL RFDGELFMVE LVLGFSDLDH QQRPGKSM
