FBK22_ARATH
ID FBK22_ARATH Reviewed; 434 AA.
AC Q93W93; Q9C897;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=F-box/kelch-repeat protein At1g55270;
GN OrderedLocusNames=At1g55270; ORFNames=F7A10.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG51566.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC027034; AAG51566.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE33217.1; -; Genomic_DNA.
DR EMBL; AF370138; AAK43953.1; -; mRNA.
DR EMBL; AY051069; AAK93746.1; -; mRNA.
DR PIR; F96594; F96594.
DR RefSeq; NP_564684.1; NM_104402.4.
DR AlphaFoldDB; Q93W93; -.
DR SMR; Q93W93; -.
DR BioGRID; 27197; 1.
DR IntAct; Q93W93; 1.
DR STRING; 3702.AT1G55270.1; -.
DR PaxDb; Q93W93; -.
DR PRIDE; Q93W93; -.
DR ProteomicsDB; 230675; -.
DR EnsemblPlants; AT1G55270.1; AT1G55270.1; AT1G55270.
DR GeneID; 841972; -.
DR Gramene; AT1G55270.1; AT1G55270.1; AT1G55270.
DR KEGG; ath:AT1G55270; -.
DR Araport; AT1G55270; -.
DR TAIR; locus:2035696; AT1G55270.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_046926_0_0_1; -.
DR InParanoid; Q93W93; -.
DR OMA; VIYDGKW; -.
DR OrthoDB; 512268at2759; -.
DR PhylomeDB; Q93W93; -.
DR PRO; PR:Q93W93; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q93W93; baseline and differential.
DR Genevisible; Q93W93; AT.
DR GO; GO:2000762; P:regulation of phenylpropanoid metabolic process; IMP:TAIR.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR InterPro; IPR045887; SAGL1-like.
DR PANTHER; PTHR46344; PTHR46344; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF01344; Kelch_1; 2.
DR SMART; SM00612; Kelch; 2.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..434
FT /note="F-box/kelch-repeat protein At1g55270"
FT /id="PRO_0000283182"
FT DOMAIN 76..122
FT /note="F-box"
FT REPEAT 129..178
FT /note="Kelch 1"
FT REPEAT 180..227
FT /note="Kelch 2"
FT REPEAT 229..276
FT /note="Kelch 3"
FT REPEAT 278..321
FT /note="Kelch 4"
FT REPEAT 325..371
FT /note="Kelch 5"
SQ SEQUENCE 434 AA; 49210 MW; 42553F723DD11E65 CRC64;
MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN
AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR KLRLVCKRWY RLASGNFFYS
QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH
LYLFGGKDPL RGSMRRVIFY NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ
RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL
EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI AVKGQSKSIL SNIWSSIAGR
ALKSHIVHCQ VLQA
