FBK30_ARATH
ID FBK30_ARATH Reviewed; 354 AA.
AC Q9M8L2; Q8LBH0;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=F-box/kelch-repeat protein At1g80440;
GN OrderedLocusNames=At1g80440; ORFNames=T21F11.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC018849; AAF27130.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36405.1; -; Genomic_DNA.
DR EMBL; AY065227; AAL38703.1; -; mRNA.
DR EMBL; AY117221; AAM51296.1; -; mRNA.
DR EMBL; AY087214; AAM64770.1; -; mRNA.
DR PIR; B96836; B96836.
DR RefSeq; NP_565238.1; NM_106692.4.
DR AlphaFoldDB; Q9M8L2; -.
DR SMR; Q9M8L2; -.
DR BioGRID; 29601; 6.
DR STRING; 3702.AT1G80440.1; -.
DR PaxDb; Q9M8L2; -.
DR PRIDE; Q9M8L2; -.
DR ProteomicsDB; 222426; -.
DR EnsemblPlants; AT1G80440.1; AT1G80440.1; AT1G80440.
DR GeneID; 844383; -.
DR Gramene; AT1G80440.1; AT1G80440.1; AT1G80440.
DR KEGG; ath:AT1G80440; -.
DR Araport; AT1G80440; -.
DR TAIR; locus:2198958; AT1G80440.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_028510_1_0_1; -.
DR InParanoid; Q9M8L2; -.
DR OMA; ACPRTCV; -.
DR OrthoDB; 701122at2759; -.
DR PhylomeDB; Q9M8L2; -.
DR PRO; PR:Q9M8L2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9M8L2; baseline and differential.
DR Genevisible; Q9M8L2; AT.
DR GO; GO:0005829; C:cytosol; IDA:TAIR.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IPI:TAIR.
DR GO; GO:0080037; P:negative regulation of cytokinin-activated signaling pathway; IGI:TAIR.
DR GO; GO:2000762; P:regulation of phenylpropanoid metabolic process; IGI:TAIR.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR InterPro; IPR044595; KMD1/2-like.
DR PANTHER; PTHR46407; PTHR46407; 1.
DR Pfam; PF01344; Kelch_1; 2.
DR SMART; SM00612; Kelch; 2.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..354
FT /note="F-box/kelch-repeat protein At1g80440"
FT /id="PRO_0000283190"
FT DOMAIN 2..49
FT /note="F-box"
FT REPEAT 63..110
FT /note="Kelch 1"
FT REPEAT 115..163
FT /note="Kelch 2"
FT REPEAT 166..213
FT /note="Kelch 3"
FT REPEAT 215..263
FT /note="Kelch 4"
FT CONFLICT 264
FT /note="V -> A (in Ref. 4; AAM64770)"
FT /evidence="ECO:0000305"
FT CONFLICT 307
FT /note="M -> K (in Ref. 4; AAM64770)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 354 AA; 38813 MW; 52F4713ACC2ECCD1 CRC64;
MELIPNLPDD VARECLLRSS YQQFPVIASV CRAWNREVSL SQFLHQRKAS RHSQELLILS
QARVDPAGSG KIIATPEYRI SVLESGSGLW TELPPIPGQT KGLPLFCRLV SVGSDLIVLG
GLDPITWQAH DSVFVFSFLT SKWRVGATMP GVRRSFFGCA SDSDRTVLVA GGHNEEKCAL
TSAMVYDVSE DKWTFLPDMA RERDECKAVF HAGRFHVIGG YATEEQGQFS KTAESFDVST
WEWGPLTEDF LDDTGDTVSP PTCVAGGDLY ACWGGDVMMF LNDKWQKVGQ IPADVYNVTY
VAVRPGMLIV IGNGKALAGY GEATVGYICD LSSSRWVKLE THGGHVQAGC FLEV
