FBK55_ARATH
ID FBK55_ARATH Reviewed; 382 AA.
AC Q9LUS6; Q8LE16;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=F-box/kelch-repeat protein At3g16580;
GN OrderedLocusNames=At3g16580; ORFNames=MGL6.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AB022217; BAB02749.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75840.1; -; Genomic_DNA.
DR EMBL; BT003948; AAO41993.1; -; mRNA.
DR EMBL; BT005043; AAO50576.1; -; mRNA.
DR EMBL; AY085675; AAM62894.1; -; mRNA.
DR RefSeq; NP_566556.1; NM_112531.2.
DR AlphaFoldDB; Q9LUS6; -.
DR BioGRID; 6242; 10.
DR IntAct; Q9LUS6; 2.
DR STRING; 3702.AT3G16580.1; -.
DR PaxDb; Q9LUS6; -.
DR PRIDE; Q9LUS6; -.
DR ProteomicsDB; 230930; -.
DR EnsemblPlants; AT3G16580.1; AT3G16580.1; AT3G16580.
DR GeneID; 820908; -.
DR Gramene; AT3G16580.1; AT3G16580.1; AT3G16580.
DR KEGG; ath:AT3G16580; -.
DR Araport; AT3G16580; -.
DR TAIR; locus:2089403; AT3G16580.
DR HOGENOM; CLU_034692_2_1_1; -.
DR InParanoid; Q9LUS6; -.
DR OMA; QSTWISE; -.
DR OrthoDB; 1020619at2759; -.
DR PhylomeDB; Q9LUS6; -.
DR PRO; PR:Q9LUS6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUS6; baseline and differential.
DR Genevisible; Q9LUS6; AT.
DR GO; GO:0005773; C:vacuole; HDA:TAIR.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..382
FT /note="F-box/kelch-repeat protein At3g16580"
FT /id="PRO_0000283215"
FT DOMAIN 9..55
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 150..196
FT /note="Kelch 1"
FT REPEAT 334..381
FT /note="Kelch 2"
FT CONFLICT 41
FT /note="Q -> H (in Ref. 4; AAM62894)"
FT /evidence="ECO:0000305"
FT CONFLICT 107
FT /note="Missing (in Ref. 4; AAM62894)"
FT /evidence="ECO:0000305"
FT CONFLICT 165
FT /note="L -> F (in Ref. 4; AAM62894)"
FT /evidence="ECO:0000305"
FT CONFLICT 168
FT /note="I -> V (in Ref. 4; AAM62894)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 382 AA; 44414 MW; 962197F3588D5BA5 CRC64;
MAHEEKRPWE FSLSLPWELI EEILSRVPPE SLLRFKTVSK QWNALFRDKT FINNHKMTFR
FILATKSKIY SVSIDPKIVV RELTLDIPGL ESHEIPKKLV DCDKLLLCDM EKGVVLWNPW
LRHSTWIDQG SNHTRMESYG IGYNNKGSYK IFAFCDRKEN HTQRLLTIHD SASDAWKDRE
PIDNSQGKQI VHNIYTKISG VSLNGNLYLV TYFETTDLVY HLIEINSSSE SVVKFCDLPC
GTSNFLKDAF VLRVFEGDRF SLLKQCHATK KIEIWVSKYK INNNLDRDVE WIKFMEVSSP
NLPDLVDGFD SQPSYFIEDK RLVVCSCNET GRAWIYVFGE NKLISKTQID SVVDLWPSHW
TFIPSLVPVP RAQREEPAEL QV
