FBK75_ARATH
ID FBK75_ARATH Reviewed; 521 AA.
AC Q9M1A7;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Jacalin-related lectin 38;
DE AltName: Full=F-box/kelch-repeat protein At3g59610;
GN Name=JAL38; OrderedLocusNames=At3g59610; ORFNames=T16L24.160;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
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DR EMBL; AL138659; CAB75458.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79945.1; -; Genomic_DNA.
DR PIR; T49302; T49302.
DR RefSeq; NP_191520.1; NM_115823.2.
DR AlphaFoldDB; Q9M1A7; -.
DR SMR; Q9M1A7; -.
DR PaxDb; Q9M1A7; -.
DR PRIDE; Q9M1A7; -.
DR EnsemblPlants; AT3G59610.1; AT3G59610.1; AT3G59610.
DR GeneID; 825130; -.
DR Gramene; AT3G59610.1; AT3G59610.1; AT3G59610.
DR KEGG; ath:AT3G59610; -.
DR Araport; AT3G59610; -.
DR TAIR; locus:2097483; AT3G59610.
DR HOGENOM; CLU_034692_2_1_1; -.
DR InParanoid; Q9M1A7; -.
DR OMA; SHITSMA; -.
DR OrthoDB; 777982at2759; -.
DR PhylomeDB; Q9M1A7; -.
DR PRO; PR:Q9M1A7; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M1A7; baseline and differential.
DR Genevisible; Q9M1A7; AT.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR CDD; cd09612; Jacalin; 1.
DR Gene3D; 2.100.10.30; -; 1.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR033734; Jacalin-like_lectin_dom_plant.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR Pfam; PF01419; Jacalin; 1.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00915; Jacalin; 1.
DR SUPFAM; SSF51101; SSF51101; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
DR PROSITE; PS51752; JACALIN_LECTIN; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Lectin; Reference proteome; Repeat.
FT CHAIN 1..521
FT /note="Jacalin-related lectin 38"
FT /id="PRO_0000283235"
FT DOMAIN 2..48
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 145..190
FT /note="Kelch 1"
FT REPEAT 326..373
FT /note="Kelch 2"
FT DOMAIN 377..519
FT /note="Jacalin-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT REPEAT 486..521
FT /note="Kelch 3"
SQ SEQUENCE 521 AA; 59914 MW; 81F42F527F6374F9 CRC64;
MMQPDHDLPY DLEGEILSHL PIQILARFRC VCKRWNTLFK ERRFFNSDLG LARPQFILLA
ESKICSVDVN LDGPSIEVHN LPSDIPGYKL YMPMHVEYCD GLFLYATCYG IGICNPWLRQ
IRWFKSSYEG YDFSGMGYDN SRQDKHYKIL GSYCTNTTMN ASVTELGSDA WKSYEFAFHS
WNLSMSPYSV SLNGNLYWVA YNHESRDYFI QSFDFSTVSF KHYCILPTKN GHRQCDGRSL
AIFREDRFSF LEQEIYNTRN IEIWVTKETI KNGDGEAVEW VNLMSVLVPE WSSLSVNYYP
PSYFVDEDKV GLTLVICCYN KEGKAYIYIA KGDKFHEIEI KDLVEYNPRH RTYFPNLIQV
PTFTMSGRSI TQHQVESRFA PLRGIQVSVG VGGDEWDDGF FDNVKEIIIH TNSLGIIFVK
FYYRNGNVRV AGAAHGDSTE TRGLMVPDDD YIEAVQGTYT ESHITSMAFR LHKGNRSLRF
GFFEGMSFVL GGARGSKIIG FYGRSSDLYL TAFGVHFSPL P
