FBK7_ARATH
ID FBK7_ARATH Reviewed; 414 AA.
AC Q9SYP3;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Putative F-box/kelch-repeat protein At1g20940 {ECO:0000305};
GN OrderedLocusNames=At1g20940 {ECO:0000312|Araport:AT1G20940};
GN ORFNames=F9H16.7 {ECO:0000312|EMBL:AAD30598.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP INTERACTION WITH DEK3, AND IDENTIFICATION BY MASS SPECTROMETRY.
RC STRAIN=cv. Columbia;
RX PubMed=25387881; DOI=10.1105/tpc.114.129254;
RA Waidmann S., Kusenda B., Mayerhofer J., Mechtler K., Jonak C.;
RT "A DEK domain-containing protein modulates chromatin structure and function
RT in Arabidopsis.";
RL Plant Cell 26:4328-4344(2014).
CC -!- FUNCTION: Probable component of an E3 ubiquitin ligase complex.
CC {ECO:0000305}.
CC -!- PATHWAY: Protein modification; protein ubiquitination. {ECO:0000305}.
CC -!- SUBUNIT: Interacts with DEK3. {ECO:0000269|PubMed:25387881}.
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DR EMBL; AC007369; AAD30598.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30044.1; -; Genomic_DNA.
DR PIR; C86342; C86342.
DR RefSeq; NP_173518.1; NM_101947.1.
DR AlphaFoldDB; Q9SYP3; -.
DR BioGRID; 23927; 1.
DR IntAct; Q9SYP3; 1.
DR STRING; 3702.AT1G20940.1; -.
DR iPTMnet; Q9SYP3; -.
DR PaxDb; Q9SYP3; -.
DR PRIDE; Q9SYP3; -.
DR EnsemblPlants; AT1G20940.1; AT1G20940.1; AT1G20940.
DR GeneID; 838688; -.
DR Gramene; AT1G20940.1; AT1G20940.1; AT1G20940.
DR KEGG; ath:AT1G20940; -.
DR Araport; AT1G20940; -.
DR TAIR; locus:2037395; AT1G20940.
DR HOGENOM; CLU_061894_0_0_1; -.
DR InParanoid; Q9SYP3; -.
DR OMA; MEANSWG; -.
DR OrthoDB; 864008at2759; -.
DR PhylomeDB; Q9SYP3; -.
DR UniPathway; UPA00143; -.
DR PRO; PR:Q9SYP3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SYP3; baseline and differential.
DR Genevisible; Q9SYP3; AT.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 1: Evidence at protein level;
KW Kelch repeat; Reference proteome; Repeat; Ubl conjugation pathway.
FT CHAIN 1..414
FT /note="Putative F-box/kelch-repeat protein At1g20940"
FT /id="PRO_0000283173"
FT DOMAIN 13..65
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 281..328
FT /note="Kelch 1"
FT /evidence="ECO:0000255"
FT REPEAT 331..378
FT /note="Kelch 2"
FT /evidence="ECO:0000255"
SQ SEQUENCE 414 AA; 46625 MW; 9F96DF3CA50A9D86 CRC64;
MNNLPRNSQF DSSSIINDLP LDLLDEILFR LEPKSMAMMR CTNNSIKSYL SDPRFGPEYP
SWVRPSLFNL GSYGATYVCC HPLVSSCDYM SPGNGVELFD GSADCYIFGS CSGLLLLYIG
CLFVANPLTK RFRILDHSGS KLIPMIVNGG LKGLSGISYP GGNVACTERA MCVGFAVNRN
LTTKRFKIVG ILEMENVYGF EINEGDSWRL SETSITTSSK SDLTTRMKPV YLDNTLHWLR
NDGSIMSFNP ETEQACLIPS IFHREPDTKL LFAESVKINR LTLISGTIET ISVYTLVENH
KWTLTRRIKN ISIEEETLVY WNIAMYDGKC LVVRVKKMGL EPLASVLHVY DMEANSWGVL
VSTLAWPNCV RDFYKLTPSL FFVEEDEQQK VLVASNDRRI SYINSIMGLI DTTK