FBK99_ARATH
ID FBK99_ARATH Reviewed; 266 AA.
AC Q67XN8; Q9SVA2;
DT 17-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=F-box/kelch-repeat protein At4g39560;
GN OrderedLocusNames=At4g39560; ORFNames=F23K16.190;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB44691.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB80619.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL078620; CAB44691.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161595; CAB80619.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE87087.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE87088.1; -; Genomic_DNA.
DR EMBL; AK176780; BAD44543.1; -; mRNA.
DR EMBL; BT029469; ABK59698.1; -; mRNA.
DR PIR; T09372; T09372.
DR RefSeq; NP_195666.2; NM_120116.4.
DR RefSeq; NP_974716.1; NM_202987.3.
DR AlphaFoldDB; Q67XN8; -.
DR SMR; Q67XN8; -.
DR PaxDb; Q67XN8; -.
DR PRIDE; Q67XN8; -.
DR EnsemblPlants; AT4G39560.1; AT4G39560.1; AT4G39560.
DR EnsemblPlants; AT4G39560.2; AT4G39560.2; AT4G39560.
DR GeneID; 830110; -.
DR Gramene; AT4G39560.1; AT4G39560.1; AT4G39560.
DR Gramene; AT4G39560.2; AT4G39560.2; AT4G39560.
DR KEGG; ath:AT4G39560; -.
DR Araport; AT4G39560; -.
DR TAIR; locus:2122472; AT4G39560.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_032521_2_0_1; -.
DR InParanoid; Q67XN8; -.
DR OMA; CLYLCLG; -.
DR OrthoDB; 709680at2759; -.
DR PhylomeDB; Q67XN8; -.
DR PRO; PR:Q67XN8; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q67XN8; baseline and differential.
DR Genevisible; Q67XN8; AT.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF01344; Kelch_1; 2.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00612; Kelch; 2.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS00018; EF_HAND_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..266
FT /note="F-box/kelch-repeat protein At4g39560"
FT /id="PRO_0000283257"
FT DOMAIN 24..70
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 130..176
FT /note="Kelch 1"
FT REPEAT 178..223
FT /note="Kelch 2"
FT REPEAT 226..266
FT /note="Kelch 3"
SQ SEQUENCE 266 AA; 29490 MW; 899EA5A0278BDCF3 CRC64;
MSSPVKKMKK KTTTSPILSP TPHSTQILSL PVDLLISILA RVSRLDYPIL SLVSKSFRSL
IASPELYETR SLLGRTESCL YLCLGIPSDF NPRWFTLCRK PKPSGHVMAA ISIPNSRPVH
CSGLVAVGSD IYNIGGSIIN EHSSSVSILD CRYHTWRDAP NMLVERNSHA ANVIDGKIYV
AGGSRDSNSS NWMEVFDIKT QTWEPVLNPI ADGCDRRIRK SAVIEEAICL FGYKGVGVAY
NPRIDKWEAI GEVNYLDLGW VWLLVA
