FBL15_ARATH
ID FBL15_ARATH Reviewed; 990 AA.
AC Q9SMY8; Q8GY34;
DT 23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=F-box/LRR-repeat protein 15;
GN Name=FBL15; OrderedLocusNames=At4g33210; ORFNames=F4I10.140;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 670-990.
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11077244; DOI=10.1016/s1360-1385(00)01769-6;
RA Xiao W., Jang J.-C.;
RT "F-box proteins in Arabidopsis.";
RL Trends Plant Sci. 5:454-457(2000).
CC -!- SEQUENCE CAUTION:
CC Sequence=BAC42533.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=CAB36795.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB80038.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL035525; CAB36795.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161583; CAB80038.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE86191.1; -; Genomic_DNA.
DR EMBL; AK117894; BAC42533.1; ALT_INIT; mRNA.
DR PIR; T05201; T05201.
DR RefSeq; NP_567916.2; NM_119475.3.
DR AlphaFoldDB; Q9SMY8; -.
DR SMR; Q9SMY8; -.
DR BioGRID; 14742; 1.
DR IntAct; Q9SMY8; 1.
DR STRING; 3702.AT4G33210.1; -.
DR iPTMnet; Q9SMY8; -.
DR PaxDb; Q9SMY8; -.
DR PRIDE; Q9SMY8; -.
DR ProteomicsDB; 222498; -.
DR EnsemblPlants; AT4G33210.1; AT4G33210.1; AT4G33210.
DR GeneID; 829457; -.
DR Gramene; AT4G33210.1; AT4G33210.1; AT4G33210.
DR KEGG; ath:AT4G33210; -.
DR Araport; AT4G33210; -.
DR TAIR; locus:2125939; AT4G33210.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_006638_0_0_1; -.
DR InParanoid; Q9SMY8; -.
DR OMA; VCADNCP; -.
DR OrthoDB; 1282076at2759; -.
DR PhylomeDB; Q9SMY8; -.
DR PRO; PR:Q9SMY8; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9SMY8; baseline and differential.
DR Genevisible; Q9SMY8; AT.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0010252; P:auxin homeostasis; IMP:TAIR.
DR GO; GO:1905393; P:plant organ formation; IMP:TAIR.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 3.80.10.10; -; 5.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR044703; SLOMO.
DR PANTHER; PTHR34709:SF12; PTHR34709:SF12; 1.
DR Pfam; PF12937; F-box-like; 1.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00367; LRR_CC; 12.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..990
FT /note="F-box/LRR-repeat protein 15"
FT /id="PRO_0000272255"
FT DOMAIN 190..236
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 237..258
FT /note="LRR 1"
FT REPEAT 280..303
FT /note="LRR 2"
FT REPEAT 317..341
FT /note="LRR 3"
FT REPEAT 348..373
FT /note="LRR 4"
FT REPEAT 397..423
FT /note="LRR 5"
FT REPEAT 441..465
FT /note="LRR 6"
FT REPEAT 466..477
FT /note="LRR 7"
FT REPEAT 478..503
FT /note="LRR 8"
FT REPEAT 519..542
FT /note="LRR 9"
FT REPEAT 550..574
FT /note="LRR 10"
FT REPEAT 589..612
FT /note="LRR 11"
FT REPEAT 614..633
FT /note="LRR 12"
FT REPEAT 640..652
FT /note="LRR 13"
FT REPEAT 653..678
FT /note="LRR 14"
FT REPEAT 734..756
FT /note="LRR 15"
FT REPEAT 758..782
FT /note="LRR 16"
FT REPEAT 785..809
FT /note="LRR 17"
FT REPEAT 813..839
FT /note="LRR 18"
FT REPEAT 882..893
FT /note="LRR 19"
FT REPEAT 894..914
FT /note="LRR 20"
FT REPEAT 915..937
FT /note="LRR 21"
FT REPEAT 949..973
FT /note="LRR 22"
SQ SEQUENCE 990 AA; 108899 MW; 4110F86CAE244773 CRC64;
MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR
LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE DCTMEEADHD SYHKRAKVYS
GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD
DNGSSDTEDF EVHIDLTDDL LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN
IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN
MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL DVSNCSCVSD ETLREIAQAC
ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL
TTVSLHLSRL QSISLVHCRK FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ
ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI
EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD CLSATTASCP LIESLVLMSC
PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY
KEGALPALEE LDLSYGTLCQ TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF
GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC
PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
