FBL26_ARATH
ID FBL26_ARATH Reviewed; 594 AA.
AC P0C2G1; C0Z3K9; Q9LYT8;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=F-box/LRR-repeat protein At3g58980;
GN OrderedLocusNames=At3g58980; ORFNames=F17J16.30;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-232.
RC STRAIN=cv. Columbia; TISSUE=Rosette leaf;
RX PubMed=19423640; DOI=10.1093/dnares/dsp009;
RA Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M., Seki M.,
RA Shinozaki K.;
RT "Analysis of multiple occurrences of alternative splicing events in
RT Arabidopsis thaliana using novel sequenced full-length cDNAs.";
RL DNA Res. 16:155-164(2009).
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB86926.1; Type=Erroneous gene model prediction; Note=The predicted gene At3g58980 has been split into 2 genes: At3g58975 and At3g58980.; Evidence={ECO:0000305};
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DR EMBL; AL163527; CAB86926.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE79856.1; -; Genomic_DNA.
DR EMBL; AK319173; BAH57288.1; -; mRNA.
DR PIR; T47780; T47780.
DR RefSeq; NP_191457.2; NM_115760.2.
DR AlphaFoldDB; P0C2G1; -.
DR PaxDb; P0C2G1; -.
DR PRIDE; P0C2G1; -.
DR ProteomicsDB; 222505; -.
DR EnsemblPlants; AT3G58980.1; AT3G58980.1; AT3G58980.
DR GeneID; 825067; -.
DR Gramene; AT3G58980.1; AT3G58980.1; AT3G58980.
DR KEGG; ath:AT3G58980; -.
DR Araport; AT3G58980; -.
DR TAIR; locus:2077675; AT3G58980.
DR HOGENOM; CLU_010721_7_1_1; -.
DR InParanoid; P0C2G1; -.
DR OMA; IICHIAS; -.
DR OrthoDB; 816963at2759; -.
DR PhylomeDB; P0C2G1; -.
DR PRO; PR:P0C2G1; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P0C2G1; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07723; LRR_2; 2.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..594
FT /note="F-box/LRR-repeat protein At3g58980"
FT /id="PRO_0000274955"
FT DOMAIN 1..49
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 103..125
FT /note="LRR 1"
FT REPEAT 128..151
FT /note="LRR 2"
FT REPEAT 152..174
FT /note="LRR 3"
FT REPEAT 203..218
FT /note="LRR 4"
FT REPEAT 219..242
FT /note="LRR 5"
FT REPEAT 249..272
FT /note="LRR 6"
FT REPEAT 288..314
FT /note="LRR 7"
FT REPEAT 315..339
FT /note="LRR 8"
FT REPEAT 344..369
FT /note="LRR 9"
FT REPEAT 403..414
FT /note="LRR 10"
FT REPEAT 415..437
FT /note="LRR 11"
FT REPEAT 450..474
FT /note="LRR 12"
FT REPEAT 503..518
FT /note="LRR 13"
FT REPEAT 519..541
FT /note="LRR 14"
FT REPEAT 584..594
FT /note="LRR 15"
SQ SEQUENCE 594 AA; 67982 MW; 40182570E776C09F CRC64;
MDRISNLPNE IICHIVSFLS AKEAAFASIL SKRWRNLFTI VIKLQFDDSV KNEGSLKDFV
DGVLALPTSS RVRSCSLECR REFDPTHYDD FNRCICALLK RGILDLKLDI CAGRRYSLPL
EVFTCKTLVK LELGSDFGGF VVDLVPEDAF LPALETLLLN YIRFKDLRRC AFEKLLSACL
VLKELVIHNM EWERWKWSGN ISSPTLERLT ISHVDLYECE FTRINLDTPN LTYLELSDAV
PDDYPIVNLD SLVEVKLDLT LMVDHKYHGY VDDNDTISSN PTNLINGLRN VEIMNLQSPN
TFQAFSYFHE AIPVFKNLYH LTITNNDTVI GFCWEFLPFV IKKCPNLKTL VIDGPLHYNE
DRPKSVCHCL SGYSFLLSCP LEVLQITDYS GTPGEVEQLK HFLEKLSGLK LVKLHSLTRF
GSDKKKLLML PRASSKCKIK HYDSLENALL PSLKTLILDS VKFYDRCGCC AFQKLLSACP
VLVESVMRNL EWEDWEWSGC ASSQTLERLT IDHRYWAEHN LESFTFDTPS LTYLDYNAHV
PGSYPTVNLD SLVEAKLNLG FTTDLVEDDD DPFTSDPTNL IKGLRNVEIL RLWM
