FBL33_ARATH
ID FBL33_ARATH Reviewed; 479 AA.
AC Q9C7X8;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=Putative F-box/LRR-repeat protein At1g56400;
GN OrderedLocusNames=At1g56400; ORFNames=F13N6.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9C7X8-1; Sequence=Displayed;
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DR EMBL; AC058785; AAG51499.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33387.1; -; Genomic_DNA.
DR PIR; G96605; G96605.
DR RefSeq; NP_176035.1; NM_104518.1. [Q9C7X8-1]
DR AlphaFoldDB; Q9C7X8; -.
DR PaxDb; Q9C7X8; -.
DR PRIDE; Q9C7X8; -.
DR EnsemblPlants; AT1G56400.1; AT1G56400.1; AT1G56400. [Q9C7X8-1]
DR GeneID; 842093; -.
DR Gramene; AT1G56400.1; AT1G56400.1; AT1G56400. [Q9C7X8-1]
DR KEGG; ath:AT1G56400; -.
DR Araport; AT1G56400; -.
DR TAIR; locus:2010708; AT1G56400.
DR eggNOG; ENOG502QVFC; Eukaryota.
DR InParanoid; Q9C7X8; -.
DR OMA; VAIINCE; -.
DR OrthoDB; 1025828at2759; -.
DR PhylomeDB; Q9C7X8; -.
DR PRO; PR:Q9C7X8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C7X8; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..479
FT /note="Putative F-box/LRR-repeat protein At1g56400"
FT /id="PRO_0000281934"
FT DOMAIN 12..60
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 99..129
FT /note="LRR 1"
FT REPEAT 139..167
FT /note="LRR 2"
FT REPEAT 186..211
FT /note="LRR 3"
FT REPEAT 228..254
FT /note="LRR 4"
FT REPEAT 287..312
FT /note="LRR 5"
FT REPEAT 342..367
FT /note="LRR 6"
FT REPEAT 419..446
FT /note="LRR 7"
SQ SEQUENCE 479 AA; 55351 MW; 49E41A4FEDF70EF5 CRC64;
MTFKRIASSI QQDRLSNLPD VLLIMIISCL SFKECIRTSV LAKRWRYLCR ETRNISFKET
EYVDHFVSDK RSKRVSFAAY MCQWVSRYHG RYIETLEIYF SIPSDFLAAV ESLIEFAVSR
QVKNLVLDFS DPSWISTSCA SRYDYVCVQL PVCVYSLTTL ESLKIYSCGF DPSKFSNSRL
PRKLSIGWIK LTDVESLLLN SPTLKSLSIN YCWGIEIRNI AGDMKEFVFE SCDFSSFMVC
CFDLPNVEIF KYSGQILSFD VKRMNMSIKD VILDFTAEGL YEDRNQRTKL EGSVLSAFLN
NLRGARTLSV CPYLLQTIQE CEDPFDLLRP METQHLVLRT RLHVMEFKGI KLLLDNCPNL
ETLTFDIFSR SLFSYNKSYY GVGPRSYWKK NLTYKSLPKT LKVVVVRNFT GRFGELNVLK
FLIQSGRGRW PGREHGPMLE RVELYMDSSM AESQKELADD GAMMLQSISG DVQVLVYDP