FBL38_ARATH
ID FBL38_ARATH Reviewed; 443 AA.
AC Q6DR13; Q8H1M3; Q9SJI4;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=F-box/LRR-repeat protein At2g42720;
GN OrderedLocusNames=At2g42720; ORFNames=F7D19.28;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RT "Arabidopsis thaliana ORF clones of hypothetical genes.";
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD21743.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC006931; AAD21743.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC10160.1; -; Genomic_DNA.
DR EMBL; AY144114; AAN08449.1; -; mRNA.
DR EMBL; AY649302; AAT69219.1; -; mRNA.
DR PIR; D84857; D84857.
DR RefSeq; NP_181800.2; NM_129833.4.
DR AlphaFoldDB; Q6DR13; -.
DR STRING; 3702.AT2G42720.1; -.
DR PaxDb; Q6DR13; -.
DR PRIDE; Q6DR13; -.
DR ProteomicsDB; 230701; -.
DR EnsemblPlants; AT2G42720.1; AT2G42720.1; AT2G42720.
DR GeneID; 818872; -.
DR Gramene; AT2G42720.1; AT2G42720.1; AT2G42720.
DR KEGG; ath:AT2G42720; -.
DR Araport; AT2G42720; -.
DR TAIR; locus:2052362; AT2G42720.
DR HOGENOM; CLU_010721_7_1_1; -.
DR InParanoid; Q6DR13; -.
DR OMA; KEDRISH; -.
DR OrthoDB; 816963at2759; -.
DR PhylomeDB; Q6DR13; -.
DR PRO; PR:Q6DR13; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q6DR13; baseline and differential.
DR Genevisible; Q6DR13; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..443
FT /note="F-box/LRR-repeat protein At2g42720"
FT /id="PRO_0000281939"
FT DOMAIN 1..47
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 139..167
FT /note="LRR 1"
FT REPEAT 169..194
FT /note="LRR 2"
FT REPEAT 201..236
FT /note="LRR 3"
FT REPEAT 271..296
FT /note="LRR 4"
FT REPEAT 323..348
FT /note="LRR 5"
FT REPEAT 363..389
FT /note="LRR 6"
FT CONFLICT 141
FT /note="R -> K (in Ref. 3; AAN08449)"
FT /evidence="ECO:0000305"
FT CONFLICT 203
FT /note="S -> P (in Ref. 3; AAN08449)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 443 AA; 50731 MW; 1B9D1AD689151F47 CRC64;
MDRISSLPDE ILEHILSFLS TKEAALTSSL STRWKNVFVF VPSLHLDYAR QHENPREFID
FVDFVNTLFN RKGNSPIKKL ALKIHLKDNQ SLQNQTHVQS WIHRVLSRGG VTDLDLFITF
KGKFQLVPLL IFKSNTLVKL RLGRGFTIKL CHENVYLPML KTLCLDTVDF DGDHNVFETL
LPRCPLLEEL VLEDQRWKQW CGSVSSPSLK RLRIRFFHIP IISLDVPGLV YLELSCIFGS
KYANVNLDSL VEARLNHWVE EQELRKLRDG SSHLVPADMM DLITGIRKVK VLHLTSDALE
LFYFSGQELP MFDNLVYLSI ASDKKQGWQI LPLLIKNSPN LETLVFKGLE HYTTKQCGDA
CVCSGILGKS SSCLSSSRVK VLEIWSYQGT SKELKQMGHF LMKLQFLELV KIRAVSNLQV
PIDIQYLLKL PRASSNCKIQ AIF
