FBL39_ARATH
ID FBL39_ARATH Reviewed; 457 AA.
AC Q0WR05; F4IP72; Q9SJI3;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 25-MAY-2022, entry version 92.
DE RecName: Full=F-box/LRR-repeat protein At2g42730;
GN OrderedLocusNames=At2g42730; ORFNames=F7D19.27;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD21734.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC006931; AAD21734.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC10161.2; -; Genomic_DNA.
DR EMBL; AK228521; BAF00444.1; -; mRNA.
DR PIR; E84857; E84857.
DR RefSeq; NP_001189735.1; NM_001202806.2.
DR AlphaFoldDB; Q0WR05; -.
DR STRING; 3702.AT2G42730.1; -.
DR PaxDb; Q0WR05; -.
DR PRIDE; Q0WR05; -.
DR ProteomicsDB; 230702; -.
DR EnsemblPlants; AT2G42730.1; AT2G42730.1; AT2G42730.
DR GeneID; 818873; -.
DR Gramene; AT2G42730.1; AT2G42730.1; AT2G42730.
DR KEGG; ath:AT2G42730; -.
DR Araport; AT2G42730; -.
DR TAIR; locus:2052351; AT2G42730.
DR eggNOG; KOG1105; Eukaryota.
DR HOGENOM; CLU_010721_7_1_1; -.
DR InParanoid; Q0WR05; -.
DR OMA; QGKPFES; -.
DR OrthoDB; 816963at2759; -.
DR PhylomeDB; Q0WR05; -.
DR PRO; PR:Q0WR05; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q0WR05; baseline and differential.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..457
FT /note="F-box/LRR-repeat protein At2g42730"
FT /id="PRO_0000281940"
FT DOMAIN 4..50
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 265..288
FT /note="LRR 1"
FT REPEAT 292..315
FT /note="LRR 2"
FT REPEAT 318..343
FT /note="LRR 3"
SQ SEQUENCE 457 AA; 51587 MW; B4CB252F012C4143 CRC64;
MNAKDVISRL PDEVLGRILS LISTKEAVST SVLSKRWKNM FVLVSNLDID DRQSVPKTKQ
NRIEIHRNYM AFVDKLLDTQ RGSSIKKLTL KSHVGVRGGT DSSRIQSWIC NVLDHGVMDL
DVFITLKGKS PPVPAMIFKS KTLVKLRVGR GFTIKLSQDV SLPLLRTLCL DSVNFVGGHN
VVGTLISRCP VLEELVVEER RCVDWTCSVS SPSLKRLHIR FDRKFTSISL DAPNLIYYKH
SGYVLGKYPN VKLDSLIEAR LNLRMDETRM VGVRNGSLGS IPADMRNLIN GIRNVRILHL
SSHTLELLYF SCKEMPLFDS LVSLSIGNDK ARGWQMLPLL IKNSPNLETL IFMGLDHYIT
NRCGDVCVCY DTDESITSCL SSSQVKVLEI LSYQGTTREL NQMKHFLEKL PCLELVKICV
VNNSNNLQTT MEMRNLMMLP RASSKCKIQV KVLTKNN