FBL53_ARATH
ID FBL53_ARATH Reviewed; 309 AA.
AC Q9M2Z5; Q8L8M6;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=F-box/LRR-repeat protein At3g48880;
GN OrderedLocusNames=At3g48880; ORFNames=T21J18.150;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AL132963; CAB87916.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78468.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78469.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM65909.1; -; Genomic_DNA.
DR EMBL; AY045976; AAK76650.1; -; mRNA.
DR EMBL; AY079352; AAL85083.1; -; mRNA.
DR EMBL; AY088907; AAM67213.1; -; mRNA.
DR PIR; T49284; T49284.
DR RefSeq; NP_001327846.1; NM_001339387.1.
DR RefSeq; NP_190457.1; NM_114747.5.
DR RefSeq; NP_850671.1; NM_180340.3.
DR AlphaFoldDB; Q9M2Z5; -.
DR SMR; Q9M2Z5; -.
DR BioGRID; 9367; 9.
DR IntAct; Q9M2Z5; 6.
DR STRING; 3702.AT3G48880.1; -.
DR PaxDb; Q9M2Z5; -.
DR PRIDE; Q9M2Z5; -.
DR ProteomicsDB; 222515; -.
DR EnsemblPlants; AT3G48880.1; AT3G48880.1; AT3G48880.
DR EnsemblPlants; AT3G48880.2; AT3G48880.2; AT3G48880.
DR EnsemblPlants; AT3G48880.3; AT3G48880.3; AT3G48880.
DR GeneID; 824049; -.
DR Gramene; AT3G48880.1; AT3G48880.1; AT3G48880.
DR Gramene; AT3G48880.2; AT3G48880.2; AT3G48880.
DR Gramene; AT3G48880.3; AT3G48880.3; AT3G48880.
DR KEGG; ath:AT3G48880; -.
DR Araport; AT3G48880; -.
DR TAIR; locus:2099443; AT3G48880.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_050941_2_0_1; -.
DR InParanoid; Q9M2Z5; -.
DR OMA; SAWRMAC; -.
DR OrthoDB; 812995at2759; -.
DR PhylomeDB; Q9M2Z5; -.
DR PRO; PR:Q9M2Z5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M2Z5; baseline and differential.
DR Genevisible; Q9M2Z5; AT.
DR GO; GO:1905761; F:SCF ubiquitin ligase complex binding; IPI:TAIR.
DR GO; GO:0050829; P:defense response to Gram-negative bacterium; IMP:TAIR.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF12937; F-box-like; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..309
FT /note="F-box/LRR-repeat protein At3g48880"
FT /id="PRO_0000281954"
FT DOMAIN 10..57
FT /note="F-box"
FT REPEAT 77..107
FT /note="LRR 1"
FT REPEAT 108..133
FT /note="LRR 2"
FT REPEAT 159..184
FT /note="LRR 3"
FT REPEAT 208..233
FT /note="LRR 4"
FT CONFLICT 13
FT /note="W -> C (in Ref. 4; AAM67213)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 309 AA; 36062 MW; 5473D2939E456F38 CRC64;
MEEEYESRRL RRWEELDTDI LVRIFQKFSV FELTSGLAHV CRGWRAACCD PILWKTVDLS
NMRSSFIKIP LEPYVYVERR SDEALTRILK LSMNLSGGST RTLIFHFNLF LSDDQLTYTA
ERCPGLRRVV LPAWNRIKKT GICKAIRIWK DLESLTMPSI ANPPYLLTEI AKNCKNFKEL
KIMGPFEVFF ANTLITCLPN IKTLSIRCSA IKREALMKIL DGLPSLEVLN ISHSHLVEYS
GWQPQQKVIV RELDKTIMEK TARLKKFLTC MDHKTCVMCQ RTENDEGIVR WYKYEEGDWK
VDEVSSLHL
