FBL57_ARATH
ID FBL57_ARATH Reviewed; 327 AA.
AC Q93ZX6; Q9LXR2;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=F-box/LRR-repeat protein At3g58900;
GN OrderedLocusNames=At3g58900; ORFNames=T20N10.250;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q93ZX6-1; Sequence=Displayed;
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB88307.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL353032; CAB88307.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE79845.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79846.1; -; Genomic_DNA.
DR EMBL; AY056203; AAL07052.1; -; mRNA.
DR EMBL; AY091395; AAM14334.1; -; mRNA.
DR PIR; T49173; T49173.
DR RefSeq; NP_001030885.1; NM_001035808.1. [Q93ZX6-1]
DR RefSeq; NP_567075.1; NM_115752.2. [Q93ZX6-1]
DR AlphaFoldDB; Q93ZX6; -.
DR PaxDb; Q93ZX6; -.
DR EnsemblPlants; AT3G58900.1; AT3G58900.1; AT3G58900. [Q93ZX6-1]
DR EnsemblPlants; AT3G58900.2; AT3G58900.2; AT3G58900. [Q93ZX6-1]
DR GeneID; 825059; -.
DR Gramene; AT3G58900.1; AT3G58900.1; AT3G58900. [Q93ZX6-1]
DR Gramene; AT3G58900.2; AT3G58900.2; AT3G58900. [Q93ZX6-1]
DR KEGG; ath:AT3G58900; -.
DR Araport; AT3G58900; -.
DR InParanoid; Q93ZX6; -.
DR PhylomeDB; Q93ZX6; -.
DR PRO; PR:Q93ZX6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q93ZX6; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..327
FT /note="F-box/LRR-repeat protein At3g58900"
FT /id="PRO_0000281958"
FT DOMAIN 1..47
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 116..144
FT /note="LRR 1"
FT REPEAT 161..192
FT /note="LRR 2"
FT REPEAT 199..230
FT /note="LRR 3"
FT REPEAT 235..261
FT /note="LRR 4"
FT REPEAT 277..308
FT /note="LRR 5"
SQ SEQUENCE 327 AA; 37470 MW; E1D4566EB19EEB02 CRC64;
MDLFSSLPNE LLYHILSFLS TKEAALTSVL SKRWRNLFAF VPYLEFDDSV FLHPEERKRE
KEGILQSFMD FVDRVLDLHG DSLIKTFSLK CKTGVDSDHV DRWICNVLAR GVSDLDLFID
FRDLYSLPHE VGVSRTLVVL RVGSESDLYW WQKFLCLPML KTLVLDSCWL CIGQFQILLL
ACPALEELDM TNTRWKDSNV TVSSSILKEL TIDLHGCCSV VNLKSLSFDA PSLVYFYYCD
SLAEDYPQVN LKNLVEAQIN LLLTQAQIEQ VRALNNEMLV ADDVFPGLGN AWKLITGLRN
VQQLYLSPDT LEVSFLSLVY FWLVGRI
