FBL59_ARATH
ID FBL59_ARATH Reviewed; 482 AA.
AC Q8GXW6; A0A1I9LNK0; Q9LXQ9;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=F-box/LRR-repeat protein At3g58930;
GN OrderedLocusNames=At3g58930; ORFNames=T20N10.280;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB88310.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL353032; CAB88310.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE79851.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64157.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64158.1; -; Genomic_DNA.
DR EMBL; AK117999; BAC42633.1; -; mRNA.
DR EMBL; BT005389; AAO63453.1; -; mRNA.
DR PIR; T49176; T49176.
DR RefSeq; NP_001319795.1; NM_001339943.1.
DR RefSeq; NP_001326204.1; NM_001339945.1.
DR RefSeq; NP_191452.2; NM_115755.4.
DR AlphaFoldDB; Q8GXW6; -.
DR BioGRID; 10377; 3.
DR IntAct; Q8GXW6; 2.
DR STRING; 3702.AT3G58930.1; -.
DR PaxDb; Q8GXW6; -.
DR PRIDE; Q8GXW6; -.
DR ProteomicsDB; 222516; -.
DR EnsemblPlants; AT3G58930.1; AT3G58930.1; AT3G58930.
DR EnsemblPlants; AT3G58930.3; AT3G58930.3; AT3G58930.
DR EnsemblPlants; AT3G58930.5; AT3G58930.5; AT3G58930.
DR GeneID; 825062; -.
DR Gramene; AT3G58930.1; AT3G58930.1; AT3G58930.
DR Gramene; AT3G58930.3; AT3G58930.3; AT3G58930.
DR Gramene; AT3G58930.5; AT3G58930.5; AT3G58930.
DR KEGG; ath:AT3G58930; -.
DR Araport; AT3G58930; -.
DR TAIR; locus:2099119; AT3G58930.
DR HOGENOM; CLU_010721_7_1_1; -.
DR InParanoid; Q8GXW6; -.
DR OMA; HYETDKC; -.
DR OrthoDB; 816963at2759; -.
DR PhylomeDB; Q8GXW6; -.
DR PRO; PR:Q8GXW6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8GXW6; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..482
FT /note="F-box/LRR-repeat protein At3g58930"
FT /id="PRO_0000281960"
FT DOMAIN 1..47
FT /note="F-box"
FT REPEAT 122..150
FT /note="LRR 1"
FT REPEAT 175..200
FT /note="LRR 2"
FT REPEAT 222..248
FT /note="LRR 3"
FT REPEAT 313..344
FT /note="LRR 4"
FT REPEAT 345..370
FT /note="LRR 5"
SQ SEQUENCE 482 AA; 55194 MW; B4C3888E7BFA9A00 CRC64;
MDRVSNLPDG VRGHILSFLP AKHIALTSVL SKSWLNLWKL IPILDIDDSE FLHPEEGKAE
RLEIRQSFVD FVDRVLALQD DSPIDRFSLK CITGIHPDHV NRWICNVLQR GVSDLDLFID
FSYEDTQEDE DMLPQEMFVS KTLVKLKIRN DRCVDWWCGK GGTSLPMLKS LYIDSDLILW
GKMKRFLSSF PVLEELRMAS MEWKESHETV SSASLRKLSI LGTGCEDYVN PKSISFDTPS
LLYLNYSDLV AEDYPLVNMG KLLEARINLI VKDDQIKRVR EPNNDLLQDD AGNVVLQFGN
VVKLMNGIQN IQILYLTADT LEVLSLCCES MPVFNNLKTL GIKSEEGRGW QAVPALLRNC
PHLEYLIIEG LLHNVTDKCG DACDCISRED KGRSLASCPV KKVEIQGFRG TMREINMIGH
FLRSFKCLKE MGIFPEEEGP TNFENPGAFE YVEKILKLYN EISNCDVYFL VWGYMRRKWT
TQ
