FBL74_ARATH
ID FBL74_ARATH Reviewed; 468 AA.
AC Q94B46; O23269;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=F-box/LRR-repeat protein At4g14096;
GN OrderedLocusNames=At4g14096; ORFNames=dl3085w;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9461215; DOI=10.1038/35140;
RA Bevan M., Bancroft I., Bent E., Love K., Goodman H.M., Dean C.,
RA Bergkamp R., Dirkse W., van Staveren M., Stiekema W., Drost L., Ridley P.,
RA Hudson S.-A., Patel K., Murphy G., Piffanelli P., Wedler H., Wedler E.,
RA Wambutt R., Weitzenegger T., Pohl T., Terryn N., Gielen J., Villarroel R.,
RA De Clercq R., van Montagu M., Lecharny A., Aubourg S., Gy I., Kreis M.,
RA Lao N., Kavanagh T., Hempel S., Kotter P., Entian K.-D., Rieger M.,
RA Schaefer M., Funk B., Mueller-Auer S., Silvey M., James R., Monfort A.,
RA Pons A., Puigdomenech P., Douka A., Voukelatou E., Milioni D.,
RA Hatzopoulos P., Piravandi E., Obermaier B., Hilbert H., Duesterhoeft A.,
RA Moores T., Jones J.D.G., Eneva T., Palme K., Benes V., Rechmann S.,
RA Ansorge W., Cooke R., Berger C., Delseny M., Voet M., Volckaert G.,
RA Mewes H.-W., Klosterman S., Schueller C., Chalwatzis N.;
RT "Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis
RT thaliana.";
RL Nature 391:485-488(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB10188.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g14090 has been split into 3 genes: At4g14096, At4g14100 and At4g14103.; Evidence={ECO:0000305};
CC Sequence=CAB78451.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g14090 has been split into 3 genes: At4g14096, At4g14100 and At4g14103.; Evidence={ECO:0000305};
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DR EMBL; Z97335; CAB10188.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161538; CAB78451.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE83371.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM67110.1; -; Genomic_DNA.
DR EMBL; AY042860; AAK68800.1; -; mRNA.
DR EMBL; AY128734; AAM91134.1; -; mRNA.
DR PIR; B71402; B71402.
DR RefSeq; NP_001319929.1; NM_001340900.1.
DR RefSeq; NP_567421.1; NM_117486.4.
DR AlphaFoldDB; Q94B46; -.
DR PaxDb; Q94B46; -.
DR PRIDE; Q94B46; -.
DR ProteomicsDB; 232072; -.
DR EnsemblPlants; AT4G14096.1; AT4G14096.1; AT4G14096.
DR EnsemblPlants; AT4G14096.2; AT4G14096.2; AT4G14096.
DR GeneID; 827047; -.
DR Gramene; AT4G14096.1; AT4G14096.1; AT4G14096.
DR Gramene; AT4G14096.2; AT4G14096.2; AT4G14096.
DR KEGG; ath:AT4G14096; -.
DR Araport; AT4G14096; -.
DR TAIR; locus:505006456; AT4G14096.
DR eggNOG; ENOG502RXIZ; Eukaryota.
DR HOGENOM; CLU_010721_7_4_1; -.
DR InParanoid; Q94B46; -.
DR OMA; HINIWES; -.
DR OrthoDB; 816963at2759; -.
DR PhylomeDB; Q94B46; -.
DR PRO; PR:Q94B46; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q94B46; baseline and differential.
DR Genevisible; Q94B46; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..468
FT /note="F-box/LRR-repeat protein At4g14096"
FT /id="PRO_0000274958"
FT DOMAIN 7..60
FT /note="F-box"
FT REPEAT 114..136
FT /note="LRR 1"
FT REPEAT 138..167
FT /note="LRR 2"
FT REPEAT 169..194
FT /note="LRR 3"
FT REPEAT 216..241
FT /note="LRR 4"
FT REPEAT 292..323
FT /note="LRR 5"
FT REPEAT 324..349
FT /note="LRR 6"
SQ SEQUENCE 468 AA; 52873 MW; C6C9DD56B1D01519 CRC64;
MDLSGCRDII SSLPEAISCH ILSFLPTKEA ASTSVLSKKW RYLFAFVPNL DLDESVYLNP
ENETEVSSSF MDFVDRVLAL QGNSPLHKFS LKIGDGVEPD RIIPWINNVL ERGVSDLDLH
VYMETEFVFP SEMFLSKTLV RLKLMLYPLL EFEDVYLPKL KTLYIDSCYF EKYGIGLTKL
LSGCPILEDL VLDDIPWCTW DFASVSVPTL KRLTFSTQVR DEFPKSVSID TPNLVYLKFT
DTVAGKYPKV NFDSLVEAHI DLRLLQGHQG YGENDMVGNA TDFIMRICNV KTLYLSSNTL
QVLTYSCDAI PIFNNLTHLT IESNPEVGWQ SLPGLLKNSP NLETLIFQGL IHKATDKCGD
VCLCKPREEI RSCLASSPVK VIKILKFGEI SDDMEKQREQ IKYFLETMPN LEKMILYYNT
TSVEDVTEVS SRLQRLVSKL ASSTCIVQLI SDNLSLSSTV STNGLLCF
