FBL79_ARATH
ID FBL79_ARATH Reviewed; 458 AA.
AC Q9LYZ4; Q8LG97;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=F-box/LRR-repeat protein At5g02910;
GN OrderedLocusNames=At5g02910; ORFNames=F9G14.220;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clone.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9LYZ4-1; Sequence=Displayed;
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DR EMBL; AL162973; CAB86045.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90534.1; -; Genomic_DNA.
DR EMBL; AY084393; AAM60970.1; -; mRNA.
DR EMBL; BT029182; ABJ17117.1; -; mRNA.
DR PIR; T48312; T48312.
DR RefSeq; NP_195911.1; NM_120369.3. [Q9LYZ4-1]
DR AlphaFoldDB; Q9LYZ4; -.
DR PaxDb; Q9LYZ4; -.
DR PRIDE; Q9LYZ4; -.
DR EnsemblPlants; AT5G02910.1; AT5G02910.1; AT5G02910. [Q9LYZ4-1]
DR GeneID; 831746; -.
DR Gramene; AT5G02910.1; AT5G02910.1; AT5G02910. [Q9LYZ4-1]
DR KEGG; ath:AT5G02910; -.
DR Araport; AT5G02910; -.
DR TAIR; locus:2151231; AT5G02910.
DR InParanoid; Q9LYZ4; -.
DR OrthoDB; 793734at2759; -.
DR PhylomeDB; Q9LYZ4; -.
DR PRO; PR:Q9LYZ4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LYZ4; baseline and differential.
DR Genevisible; Q9LYZ4; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR044997; F-box_plant.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR32153; PTHR32153; 1.
DR Pfam; PF00646; F-box; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..458
FT /note="F-box/LRR-repeat protein At5g02910"
FT /id="PRO_0000281976"
FT DOMAIN 10..56
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 57..84
FT /note="LRR 1"
FT REPEAT 86..112
FT /note="LRR 2"
FT REPEAT 133..161
FT /note="LRR 3"
FT REPEAT 162..187
FT /note="LRR 4"
FT REPEAT 226..251
FT /note="LRR 5"
FT REPEAT 260..285
FT /note="LRR 6"
FT REPEAT 325..353
FT /note="LRR 7"
FT REPEAT 389..414
FT /note="LRR 8"
FT CONFLICT 248
FT /note="D -> G (in Ref. 3; AAM60970)"
FT /evidence="ECO:0000305"
FT CONFLICT 458
FT /note="R -> L (in Ref. 3; AAM60970)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 458 AA; 51846 MW; 0AF7D5AE9B507D74 CRC64;
MITGDSIDGM DFISSLPDEI LHHILSSVPT KSAIRTSLLS KRWRYVWSET PSLSIDCRRA
DPNSIDKTLS FFSAPKITSF HLHTTLLNRI DSVNGCIEFA ISHNAEKLSL ESRDYRVRNY
KFPDFFYTNS SVKQLFVDSG SVHLIPRCTV SWTSLKNLSL SNCTLSDESF LKILSGSPLL
ESLELLYCAE YMCLDLSQSQ HLRRLEIDRS DWFMGPTKIV APHLHCLRLR HSRLPCSLVD
VSSLTEADLN IYFGDLKTVT AGFLQHNVVK MLQMLQNVEK LTIGGTFLQM LSLAALCGVP
FPTLKVKTLT LETMIIRSVI PGITKLLRYT PGLRKLTIHT VKCSSISELH LNDYLRKHSL
NQRQCWRSKD SVFPGSLETI SMLASKHAES NLVALFMERL LKSTKSLETM VVLLVDYLDA
LGFEELLAMA TTLSHNNDVS VLIKRSYIKY VSNTFPQR
