FBW3_ARATH
ID FBW3_ARATH Reviewed; 539 AA.
AC Q94AD8;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=F-box/WD-40 repeat-containing protein At5g21040;
GN OrderedLocusNames=At5g21040; ORFNames=T10F18.70;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
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DR EMBL; AF296834; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED92922.1; -; Genomic_DNA.
DR EMBL; CP002688; AED92923.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM69782.1; -; Genomic_DNA.
DR EMBL; AY048254; AAK82516.1; -; mRNA.
DR EMBL; BT002693; AAO11609.1; -; mRNA.
DR RefSeq; NP_001190352.1; NM_001203423.1.
DR RefSeq; NP_001331436.1; NM_001343696.1.
DR RefSeq; NP_568408.1; NM_122112.4.
DR AlphaFoldDB; Q94AD8; -.
DR SMR; Q94AD8; -.
DR BioGRID; 17503; 7.
DR STRING; 3702.AT5G21040.2; -.
DR iPTMnet; Q94AD8; -.
DR PaxDb; Q94AD8; -.
DR PRIDE; Q94AD8; -.
DR ProteomicsDB; 231001; -.
DR EnsemblPlants; AT5G21040.1; AT5G21040.1; AT5G21040.
DR EnsemblPlants; AT5G21040.2; AT5G21040.2; AT5G21040.
DR EnsemblPlants; AT5G21040.3; AT5G21040.3; AT5G21040.
DR GeneID; 832228; -.
DR Gramene; AT5G21040.1; AT5G21040.1; AT5G21040.
DR Gramene; AT5G21040.2; AT5G21040.2; AT5G21040.
DR Gramene; AT5G21040.3; AT5G21040.3; AT5G21040.
DR KEGG; ath:AT5G21040; -.
DR Araport; AT5G21040; -.
DR TAIR; locus:2147077; AT5G21040.
DR eggNOG; KOG0274; Eukaryota.
DR HOGENOM; CLU_486989_0_0_1; -.
DR InParanoid; Q94AD8; -.
DR OMA; FRVWEHE; -.
DR OrthoDB; 1109214at2759; -.
DR PhylomeDB; Q94AD8; -.
DR PRO; PR:Q94AD8; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q94AD8; baseline and differential.
DR Genevisible; Q94AD8; AT.
DR GO; GO:0005737; C:cytoplasm; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0016036; P:cellular response to phosphate starvation; IMP:TAIR.
DR Gene3D; 2.130.10.10; -; 2.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF00400; WD40; 2.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; WD repeat.
FT CHAIN 1..539
FT /note="F-box/WD-40 repeat-containing protein At5g21040"
FT /id="PRO_0000281989"
FT DOMAIN 65..111
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 160..199
FT /note="WD 1"
FT REPEAT 201..239
FT /note="WD 2"
FT REPEAT 255..292
FT /note="WD 3"
FT REPEAT 294..330
FT /note="WD 4"
FT REPEAT 334..373
FT /note="WD 5"
FT REPEAT 382..419
FT /note="WD 6"
FT REPEAT 433..477
FT /note="WD 7"
FT REGION 505..539
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 539 AA; 60555 MW; 6A321334B017BDD9 CRC64;
MEFECQERLE AANDQRSESG LLNTDLRIGN DGSVEIPNVK LCCQKKKGTL VPSGSKQLLS
DKDLSTTIID LPQALISEIL NCLDPKELGL VSCVSTYLHR LASEHHAWKE FYRERWGLPV
VFGAASSGLS DERSWKDLFV EREFRSRTFL GRYSIDTLYG HTEAVRTVFL LASAKLVFTS
GYDSIVRMWD MEEGLSIAAS KPLGCTIRAL AADTKLLVAG GTDGFIHCWK SLDGLRNLFD
LTGFQKEKTE FRLWGHEGPI TSLALDMTSI FSGSWDMSVR IWDRSSMKCV KTLRHSDWVW
GLAPHETTLA STSGSDVYIW DVSSETPLAI IPDAHEGTTY SLARSHTGDF LFTGGEDGGI
KMFEIRRYGS ETSVVLISQW MPHTSPVYSL SFEFPWLVSA SGDGKLALID VRKLLKTNRC
AYSKRISSST VEPPQRMLHG FGSNLFSVDV GYDRIVCGGE EGTVRIWNFT QALEIERRTR
ALKGMRHENR MRRRRMQMEM NAKNGRPDQC SIAAHKNPIN GERNRAWHSK RRASGKAKA
