FBW4_ARATH
ID FBW4_ARATH Reviewed; 454 AA.
AC Q9SV01;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 2.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=F-box/WD-40 repeat-containing protein At3g52030;
GN OrderedLocusNames=At3g52030; ORFNames=F4F15.140;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9SV01-1; Sequence=Displayed;
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB41323.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL049711; CAB41323.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE78876.1; -; Genomic_DNA.
DR PIR; T49082; T49082.
DR RefSeq; NP_190771.2; NM_115062.2. [Q9SV01-1]
DR AlphaFoldDB; Q9SV01; -.
DR SMR; Q9SV01; -.
DR BioGRID; 9684; 5.
DR STRING; 3702.AT3G52030.1; -.
DR PaxDb; Q9SV01; -.
DR PRIDE; Q9SV01; -.
DR ProteomicsDB; 230836; -. [Q9SV01-1]
DR EnsemblPlants; AT3G52030.1; AT3G52030.1; AT3G52030. [Q9SV01-1]
DR GeneID; 824366; -.
DR Gramene; AT3G52030.1; AT3G52030.1; AT3G52030. [Q9SV01-1]
DR KEGG; ath:AT3G52030; -.
DR Araport; AT3G52030; -.
DR TAIR; locus:2083735; AT3G52030.
DR eggNOG; ENOG502QWFJ; Eukaryota.
DR InParanoid; Q9SV01; -.
DR OrthoDB; 625884at2759; -.
DR PhylomeDB; Q9SV01; -.
DR PRO; PR:Q9SV01; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SV01; baseline and differential.
DR Genevisible; Q9SV01; AT.
DR GO; GO:0048188; C:Set1C/COMPASS complex; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0051568; P:histone H3-K4 methylation; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF12937; F-box-like; 1.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; SSF50978; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Alternative splicing; Reference proteome; Repeat; WD repeat.
FT CHAIN 1..454
FT /note="F-box/WD-40 repeat-containing protein At3g52030"
FT /id="PRO_0000281990"
FT DOMAIN 20..66
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 85..116
FT /note="WD 1"
FT REPEAT 117..153
FT /note="WD 2"
FT REPEAT 170..214
FT /note="WD 3"
FT REPEAT 215..255
FT /note="WD 4"
FT REPEAT 258..296
FT /note="WD 5"
FT REPEAT 301..340
FT /note="WD 6"
FT REPEAT 343..383
FT /note="WD 7"
FT REPEAT 422..454
FT /note="WD 8"
SQ SEQUENCE 454 AA; 50966 MW; F729B133679FFC82 CRC64;
MGRTETGDES SARKMRRKVP TSIESLDADI LCIIFSFLDL FDLVHCTVVC NSWNAVIKRL
KLLQASCRKM HHLGSDSPSS STSLDRPAEI DVEDFAMKHH KMALLRGRIE IERWEAHSHR
VSQCRMKKGL LLTGVGDKVM RLWSLKSYKC MEEYSLPDAS SLIDFDFDES KKLEVVSLAW
EYFDSVVVVV VEIVGLVGTR ISIWRRNGQR SIFPSRAGTF PKGLCMRYID PEAVVGCEDG
TARVFDMYSK TCSQIIRTQG GPITCLSLSD NQLFLSGSSL GRVTVSDPLM DQPVATLKST
ITAGGIQTIC FNQGTNLAFI GTTGGYVSCW DLRKMDRLWE KRVSPNVVYS IQQLRNDTSV
MVAGGIDGVL RMIDQKSGRV LSRVIMDDKF STTSTRNNQV VIEKRRGKRV SQDMEIDKIE
RKVRPQISCI AMGMKKMVTA HNGKCISVWK FNLS
