FBX6_ARATH
ID FBX6_ARATH Reviewed; 467 AA.
AC Q9FZK1; Q8LEE1;
DT 23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=F-box only protein 6;
GN Name=FBX6; OrderedLocusNames=At1g27340; ORFNames=F17L21.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11077244; DOI=10.1016/s1360-1385(00)01769-6;
RA Xiao W., Jang J.-C.;
RT "F-box proteins in Arabidopsis.";
RL Trends Plant Sci. 5:454-457(2000).
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DR EMBL; AC004557; AAF99732.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30808.1; -; Genomic_DNA.
DR EMBL; AY085471; AAM62697.1; -; mRNA.
DR EMBL; BT025325; ABF57281.1; -; mRNA.
DR RefSeq; NP_564278.1; NM_102496.4.
DR AlphaFoldDB; Q9FZK1; -.
DR SMR; Q9FZK1; -.
DR BioGRID; 24858; 7.
DR IntAct; Q9FZK1; 7.
DR STRING; 3702.AT1G27340.1; -.
DR PaxDb; Q9FZK1; -.
DR PRIDE; Q9FZK1; -.
DR EnsemblPlants; AT1G27340.1; AT1G27340.1; AT1G27340.
DR GeneID; 839623; -.
DR Gramene; AT1G27340.1; AT1G27340.1; AT1G27340.
DR KEGG; ath:AT1G27340; -.
DR Araport; AT1G27340; -.
DR TAIR; locus:2015974; AT1G27340.
DR eggNOG; ENOG502QQ35; Eukaryota.
DR HOGENOM; CLU_038778_2_1_1; -.
DR InParanoid; Q9FZK1; -.
DR OMA; ARTGYNS; -.
DR OrthoDB; 1357499at2759; -.
DR PhylomeDB; Q9FZK1; -.
DR PRO; PR:Q9FZK1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FZK1; baseline and differential.
DR Genevisible; Q9FZK1; AT.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IBA:GO_Central.
DR GO; GO:0010305; P:leaf vascular tissue pattern formation; IMP:TAIR.
DR GO; GO:0010928; P:regulation of auxin mediated signaling pathway; IMP:TAIR.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR GO; GO:0060776; P:simple leaf morphogenesis; IMP:TAIR.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR Pfam; PF00646; F-box; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF50965; SSF50965; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..467
FT /note="F-box only protein 6"
FT /id="PRO_0000273539"
FT DOMAIN 114..163
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 163..211
FT /note="Kelch 1"
FT REPEAT 252..305
FT /note="Kelch 2"
FT REPEAT 406..456
FT /note="Kelch 3"
FT CONFLICT 259
FT /note="S -> F (in Ref. 3; AAM62697)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 467 AA; 52822 MW; 7C16A78A3B026F34 CRC64;
MEEELAMLRQ LIGQLQELLH NGSPPPPSSS SSLSSSSPSF LVLHHPQYQN GWCLPCIEDT
SADDCCDIVM AGGKRPGIFK MLETVKPPVK RTRKERTQGK SCTEVDEISG NMDQEIWQEF
PQDLFEDVVS RLPMATFFQF RAVCRKWNAL IDSDSFSRCF TELPQTIPWF YTITHENVNS
GQVYDPSLKK WHHPIIPALP KKSIVLPMAS AGGLVCFLDI GHRNFYVSNP LTKSFRELPA
RSFKVWSRVA VGMTLNGNST SHGYKVLWVG CEGEYEVYDS LSNVWTKRGT IPSNIKLPVL
LNFKSQPVAI HSTLYFMLTD PEGILSYDMV SGKWKQFIIP GPPDLSDHTL AACGERLMLV
GLLTKNAATC VCIWELQKMT LLWKEVDRMP NIWCLEFYGK HIRMNCLGNK GCLILLSLRS
RQMNRLITYN AVTREWTKVP GCTVPRGRKR LWIACGTAFH PSPTARA