AIMR_BPPHT
ID AIMR_BPPHT Reviewed; 378 AA.
AC P0DOE3;
DT 15-MAR-2017, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2017, sequence version 1.
DT 23-FEB-2022, entry version 24.
DE RecName: Full=AimR transcriptional regulator {ECO:0000303|PubMed:28099413};
DE AltName: Full=Arbitrium communication peptide receptor {ECO:0000303|PubMed:28099413};
GN Name=aimR; OrderedLocusNames=phi3T_89;
OS Bacillus phage phi3T (Bacteriophage phi-3T).
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales; Siphoviridae; Spbetavirus; unclassified Spbetavirus.
OX NCBI_TaxID=10736;
OH NCBI_TaxID=1423; Bacillus subtilis.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, SUBUNIT, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=28099413; DOI=10.1038/nature21049;
RA Erez Z., Steinberger-Levy I., Shamir M., Doron S., Stokar-Avihail A.,
RA Peleg Y., Melamed S., Leavitt A., Savidor A., Albeck S., Amitai G.,
RA Sorek R.;
RT "Communication between viruses guides lysis-lysogeny decisions.";
RL Nature 541:488-493(2017).
CC -!- FUNCTION: Transcriptional regulator which is part of the latency-
CC replication switch system that decides at the onset of infection
CC whether to replicate and lyse the host or to lysogenize (latency) and
CC keep the host viable. Activates the transcription of the aimX locus.
CC Transcriptional activation of aimX seems to lead to the productive
CC viral replication (lytic cycle), aimX possibly acting as a regulatory
CC non-coding RNA. {ECO:0000269|PubMed:28099413}.
CC -!- SUBUNIT: Homodimer. Interacts with the viral arbitrium peptide, this
CC interaction changes the oligomeric state of AimR from an active dimer
CC to an inactive monomer leading to lysogeny.
CC {ECO:0000269|PubMed:28099413}.
CC -!- DISRUPTION PHENOTYPE: Knockdown results in decreased AimX transcription
CC and increased lysogeny. {ECO:0000269|PubMed:28099413}.
CC -!- WEB RESOURCE: Name=Protein Spotlight; Note=Between you and me - Issue
CC 190 of April 2017;
CC URL="https://web.expasy.org/spotlight/back_issues/190/";
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DR EMBL; KY030782; APD21232.1; -; Genomic_DNA.
DR PDB; 5ZVV; X-ray; 2.20 A; A/B=1-378.
DR PDB; 5ZVW; X-ray; 2.29 A; A=1-378.
DR PDBsum; 5ZVV; -.
DR PDBsum; 5ZVW; -.
DR SMR; P0DOE3; -.
DR Proteomes; UP000188400; Genome.
DR GO; GO:0098689; P:latency-replication decision; IDA:UniProtKB.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR SUPFAM; SSF48452; SSF48452; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Activator; Latency-replication decision; Transcription;
KW Transcription regulation.
FT CHAIN 1..378
FT /note="AimR transcriptional regulator"
FT /id="PRO_0000439256"
FT HELIX 1..7
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 10..20
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 25..32
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 36..38
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 43..52
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 54..56
FT /evidence="ECO:0007829|PDB:5ZVW"
FT HELIX 57..65
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 73..84
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 88..99
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 104..120
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 126..135
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 141..157
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 161..169
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 173..175
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 180..199
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 203..216
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 220..233
FT /evidence="ECO:0007829|PDB:5ZVV"
FT TURN 234..237
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 239..248
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 249..252
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 256..273
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 287..300
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 303..314
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 320..334
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 337..349
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 357..365
FT /evidence="ECO:0007829|PDB:5ZVV"
FT HELIX 370..376
FT /evidence="ECO:0007829|PDB:5ZVV"
SQ SEQUENCE 378 AA; 44107 MW; 053B37DF45FAC825 CRC64;
MIKNECEKDN QLAARLAKLA GYEKVNGFYK FVNTPEKEME NLGGLLKIVK NLFPDSEEQL
LSEYFLELDP NKKCARQSVE YSDINQWDTL TDKIIINLCN SKNSTSQEWG KVYSLHRKLN
KNEISLNDAI RESGKCKIKS AEMLFFSNAM LMYAYLNIGE FGLMKSTSKL LEFDDLPEGF
IKESFKSRVS MLEANISLNE NSLLEARQHS NRAIENSNVN RICFFAYLTI GNTLIFEDYD
EAKKAYIKGQ KYAKNPVHQE MLDGALCFLS NIWKKENQWV NYNSDNIKYL QLRAFYYINQ
GNIEEATEIL DELSSRDQDE NELGFYYYYK GLISQDKTDY YKSIRYFKKS DDKYFIQLPL
LQLERMGADL ELLNLISI