FDL10_ARATH
ID FDL10_ARATH Reviewed; 458 AA.
AC Q9ZV93;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=F-box/FBD/LRR-repeat protein At1g78750;
GN OrderedLocusNames=At1g78750; ORFNames=F9K20.21;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC005679; AAC83035.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36146.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59845.1; -; Genomic_DNA.
DR PIR; E96816; E96816.
DR RefSeq; NP_001319406.1; NM_001334843.1.
DR RefSeq; NP_177996.1; NM_106522.2.
DR AlphaFoldDB; Q9ZV93; -.
DR PaxDb; Q9ZV93; -.
DR PRIDE; Q9ZV93; -.
DR EnsemblPlants; AT1G78750.1; AT1G78750.1; AT1G78750.
DR EnsemblPlants; AT1G78750.2; AT1G78750.2; AT1G78750.
DR GeneID; 844211; -.
DR Gramene; AT1G78750.1; AT1G78750.1; AT1G78750.
DR Gramene; AT1G78750.2; AT1G78750.2; AT1G78750.
DR KEGG; ath:AT1G78750; -.
DR Araport; AT1G78750; -.
DR TAIR; locus:2037578; AT1G78750.
DR eggNOG; ENOG502SVTR; Eukaryota.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9ZV93; -.
DR OMA; DTYLLCG; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9ZV93; -.
DR PRO; PR:Q9ZV93; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9ZV93; baseline and differential.
DR Genevisible; Q9ZV93; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..458
FT /note="F-box/FBD/LRR-repeat protein At1g78750"
FT /id="PRO_0000283103"
FT DOMAIN 17..67
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 152..183
FT /note="LRR 1"
FT REPEAT 184..209
FT /note="LRR 2"
FT REPEAT 231..258
FT /note="LRR 3"
FT REPEAT 302..327
FT /note="LRR 4"
FT REPEAT 345..370
FT /note="LRR 5"
FT DOMAIN 376..428
FT /note="FBD"
SQ SEQUENCE 458 AA; 52428 MW; 855D6E61DEA2F6F3 CRC64;
MDGAGEKRVR AKGSREVDWI SNLPETLLCQ VLFYLPTKDV VKSSVLSSRW RNLWKYVPGF
NLSYCDFHVR NTFSYDHNTF LRFVDSFMGF NSQSCLQSFR LEYDSSGYGE PKLALIRRWI
NSVVSRKVKY LGVLDDSCDN YEFEMPPTLY TCETLVYLTL DGLSLASPKF VSLPSLKELH
LSIVKFADHM ALETLISQCP VLENLNINRS FCDDFEFTCV RSQSLLSFTH VADTDEMLNE
DLVVAIDAPK LKYLRLSDHR IASFILNDLA SLVEADIDTV FNLICKKMFN PNDLNKRNMI
RDFLVGISSI KTLIIASSTL EVIYDYSRCE PLPLFRNLSS LRVDFYGYKW EMLPIFLESC
PNLKSLVVGS ANYREKEGIN ILSVPRGFLS SLEYVKIERP LKGEAMEMKL VSYLLENSTI
LKKLTLCLDD SIKKEESVIL KELNTIPRLS SACQVVIL