FDL12_ARATH
ID FDL12_ARATH Reviewed; 439 AA.
AC Q9ZVA3;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At1g78840;
GN OrderedLocusNames=At1g78840; ORFNames=F9K20.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC005679; AAC83027.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36161.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59675.1; -; Genomic_DNA.
DR PIR; G96817; G96817.
DR RefSeq; NP_001319408.1; NM_001334849.1.
DR RefSeq; NP_178005.1; NM_106532.1.
DR AlphaFoldDB; Q9ZVA3; -.
DR iPTMnet; Q9ZVA3; -.
DR PaxDb; Q9ZVA3; -.
DR PRIDE; Q9ZVA3; -.
DR EnsemblPlants; AT1G78840.1; AT1G78840.1; AT1G78840.
DR EnsemblPlants; AT1G78840.2; AT1G78840.2; AT1G78840.
DR GeneID; 844221; -.
DR Gramene; AT1G78840.1; AT1G78840.1; AT1G78840.
DR Gramene; AT1G78840.2; AT1G78840.2; AT1G78840.
DR KEGG; ath:AT1G78840; -.
DR Araport; AT1G78840; -.
DR TAIR; locus:2037528; AT1G78840.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9ZVA3; -.
DR OMA; FIAWISN; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9ZVA3; -.
DR PRO; PR:Q9ZVA3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9ZVA3; baseline and differential.
DR Genevisible; Q9ZVA3; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..439
FT /note="Putative F-box/FBD/LRR-repeat protein At1g78840"
FT /id="PRO_0000283105"
FT DOMAIN 5..60
FT /note="F-box"
FT REPEAT 99..125
FT /note="LRR 1"
FT REPEAT 131..157
FT /note="LRR 2"
FT REPEAT 158..183
FT /note="LRR 3"
FT REPEAT 207..234
FT /note="LRR 4"
FT REPEAT 263..288
FT /note="LRR 5"
FT REPEAT 313..341
FT /note="LRR 6"
FT DOMAIN 348..405
FT /note="FBD"
SQ SEQUENCE 439 AA; 50510 MW; FAE09CF36B1ADFE7 CRC64;
MENKDLISQL LPDHVLHEIL LKLATKDSVK TSILSTRWRY IWQRVPGLDL NQTNFRYKGL
KGFVNRFLDL DKKSLIYQLK LEFDGRKYET EGSLFNKWVD SVVTRGVQHL VNNYCPIKLP
GSISMCETLV HLKLVEVGID SFDSVSLPRL ETMHLLSVWF SSEAALERLI SSSPVLQVLY
IEKVWNVEVI RVRSQTLYSL RMRIWKRDLD WNKDLTKIGL VIDAPRLKSL NLQIHRFKDL
VLNSVCSPLK VDISISKGEF NPINSLTMKT LRTFIAWISN VTNLALNYCC LEAMYAYSSS
EPLPQFSNLT HLEVSMDSSC LKLLPTFLAS CPNLKSLELW VHDHRLDILD ISRSTMPKCL
LISLKFVTIY STAMISSSVE NQVETELVKY ILGNAAVVKE LTLRFILWAE EHRFQLSKQI
LAFPKLSSAC QVFLHSSFF