FDL13_ARATH
ID FDL13_ARATH Reviewed; 464 AA.
AC Q9M8L5; F4HTX6;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=F-box/FBD/LRR-repeat protein At1g80470;
GN OrderedLocusNames=At1g80470; ORFNames=T21F11.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC018849; AAF27122.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36409.2; -; Genomic_DNA.
DR PIR; E96836; E96836.
DR RefSeq; NP_001319428.1; NM_001334988.1.
DR AlphaFoldDB; Q9M8L5; -.
DR PaxDb; Q9M8L5; -.
DR PRIDE; Q9M8L5; -.
DR ProteomicsDB; 222593; -.
DR EnsemblPlants; AT1G80470.1; AT1G80470.1; AT1G80470.
DR GeneID; 844386; -.
DR Gramene; AT1G80470.1; AT1G80470.1; AT1G80470.
DR KEGG; ath:AT1G80470; -.
DR Araport; AT1G80470; -.
DR TAIR; locus:2198913; AT1G80470.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9M8L5; -.
DR OMA; DEHIHED; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9M8L5; -.
DR PRO; PR:Q9M8L5; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9M8L5; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..464
FT /note="F-box/FBD/LRR-repeat protein At1g80470"
FT /id="PRO_0000283106"
FT DOMAIN 15..62
FT /note="F-box"
FT REPEAT 96..122
FT /note="LRR 1"
FT REPEAT 123..150
FT /note="LRR 2"
FT REPEAT 152..178
FT /note="LRR 3"
FT REPEAT 197..222
FT /note="LRR 4"
FT REPEAT 223..249
FT /note="LRR 5"
FT REPEAT 273..298
FT /note="LRR 6"
FT DOMAIN 359..413
FT /note="FBD"
SQ SEQUENCE 464 AA; 52942 MW; C66879007B8328B8 CRC64;
MAEPSVKKSK LTESDWISGL ADDLLLQILS KVPTRESVFT SRMSKRWRNL WRHVPALDLD
SSKFPHESDL EDFFDSFLQF DGNLKIERFK WIYNVEEHCD PEFVSRIDHV VKRGLKDLTI
LSKVNIEDDS VRMPVSLYSC ATLVNLTLYS VVFDAPRAQL VSLPCLKTMH LEAVKFDGET
ILGTLISSCS FLDELTIITH DHDELGDVSV RSPSLRRFKL ESMREDYDEC EDPNVEVDTP
GLEYMSITDY QSESFIIHNI SPCAKVNIDV VFDAEDEDSV IHDFITAIST VRELTISART
LEMIHDYVES ETELVPQFSN LFCLHASFSE SSWEMFPTFL GCCPNLHSLF LEFDCLPEKE
EINLSLVPHC FESSLEYVQL KVPITVSETS SKMELAIYFV RNCSVLKKLM LNESFGNVIN
KVRKIPKRSE GCKIAMPKPL HENVSHGSSL LPLICGFIPK ILDQ