FDL14_ARATH
ID FDL14_ARATH Reviewed; 448 AA.
AC Q6NKX3; Q9SI10;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=F-box/FBD/LRR-repeat protein At2g04230;
GN OrderedLocusNames=At2g04230; ORFNames=T23O15.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Carninci P., Hayashizaki Y.,
RA Ishida J., Kamiya A., Kawai J., Narusaka M., Sakurai T., Satou M., Seki M.,
RA Shinozaki K., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD27915.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC007213; AAD27915.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC05809.1; -; Genomic_DNA.
DR EMBL; BT012570; AAS99714.1; -; mRNA.
DR EMBL; AK176557; BAD44320.1; -; mRNA.
DR PIR; D84455; D84455.
DR RefSeq; NP_178506.3; NM_126458.5.
DR AlphaFoldDB; Q6NKX3; -.
DR BioGRID; 361; 3.
DR IntAct; Q6NKX3; 1.
DR STRING; 3702.AT2G04230.1; -.
DR PaxDb; Q6NKX3; -.
DR PRIDE; Q6NKX3; -.
DR ProteomicsDB; 230872; -.
DR EnsemblPlants; AT2G04230.1; AT2G04230.1; AT2G04230.
DR GeneID; 814960; -.
DR Gramene; AT2G04230.1; AT2G04230.1; AT2G04230.
DR KEGG; ath:AT2G04230; -.
DR Araport; AT2G04230; -.
DR TAIR; locus:2055993; AT2G04230.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q6NKX3; -.
DR OMA; DINGWNL; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q6NKX3; -.
DR PRO; PR:Q6NKX3; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q6NKX3; baseline and differential.
DR Genevisible; Q6NKX3; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..448
FT /note="F-box/FBD/LRR-repeat protein At2g04230"
FT /id="PRO_0000283107"
FT DOMAIN 12..64
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 72..98
FT /note="LRR 1"
FT REPEAT 149..176
FT /note="LRR 2"
FT REPEAT 177..202
FT /note="LRR 3"
FT REPEAT 204..225
FT /note="LRR 4"
FT REPEAT 226..251
FT /note="LRR 5"
FT REPEAT 271..296
FT /note="LRR 6"
FT REPEAT 319..345
FT /note="LRR 7"
FT DOMAIN 359..410
FT /note="FBD"
SQ SEQUENCE 448 AA; 51309 MW; 2D6347F6F9A10F21 CRC64;
MEQKFKTDSM NEDRISDLPD ALLLQILSSL PTENAIATSV LSKRWRSLWT MLPKLKFDSN
FNPVFDDDNI DPTMFSENVY KTLSLHKAPV LESLHLSFEG RTDCLHVGIW IATAFARGVR
KLVLDSFYQE DQTVTLPSVL FSYNDSLEIL KLKCAIDLDF PSRVCLKSLR KLYLDQVHFK
DEESVCNLLC GCPSLQDLVV HRYSNADVAT FTIASPSLQR LTIEDLRQEG GYGNGSYVIN
APGLKYLNIN GVIDIESCLI DKALELEEAK ISNVSGITNE NILESLTSAK RLILHLSPLE
VKVPTGKIFD QLGCLELLTH EREWWNLLSI MLDSSPKLQI LKLTDVYLHD NKTNPDERKW
NPPKCAPECL LFHLETFLWI GYEWQRGDEK EVATYILENA RRLKKATFST KRIGREKLED
FEKRREMLNE LAIVLWDSNS CHLVFEST
