FDL15_ARATH
ID FDL15_ARATH Reviewed; 438 AA.
AC Q9SJ32;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 08-FEB-2011, sequence version 2.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At2g05300;
GN OrderedLocusNames=At2g05300; ORFNames=F5G3.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- CAUTION: Could be the product of a pseudogene. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD29066.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAD29066.1; Type=Erroneous termination; Note=Truncated C-terminus.; Evidence={ECO:0000305};
CC Sequence=AY080586; Type=Erroneous termination; Note=Truncated C-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC007018; AAD29066.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AY080586; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; H84466; H84466.
DR AlphaFoldDB; Q9SJ32; -.
DR SMR; Q9SJ32; -.
DR PRIDE; Q9SJ32; -.
DR Araport; AT2G05300; -.
DR InParanoid; Q9SJ32; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SJ32; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 5: Uncertain;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..438
FT /note="Putative F-box/FBD/LRR-repeat protein At2g05300"
FT /id="PRO_0000283108"
FT DOMAIN 13..59
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 135..166
FT /note="LRR 1"
FT REPEAT 167..192
FT /note="LRR 2"
FT REPEAT 235..261
FT /note="LRR 3"
FT REPEAT 318..346
FT /note="LRR 4"
FT DOMAIN 362..409
FT /note="FBD"
SQ SEQUENCE 438 AA; 50383 MW; BC368828021C7F1A CRC64;
MSCSKGLSQS LKEDRISQLP DPLLTQILNL LPTEEAVKTS VLSTRWRTLW LWVPNLELSF
SKFPCFNAFL SFGNLFFDSD RASCVESLKL YLDGNDASYL KPWVDALVKR KIQRLYVRRT
LGGYSHVMPL SLYVCDSLVS LRLYRLSLVD AEFVSLPCLK ILRLKDIVFH NETTFERLVS
SCPVLEELKI DVVWNDGNVY KVHSRSLKRF CFRSSSLRFD ESVPGVVVDA PLLCCLIIDD
SVSESFVVTD LESNAKFDIS LCFRLWRFDE AKRSIINMFL AWISRVRDMK ICAHTFKLIH
RYSESSPLPR FGYMSSLYVT LNASELEWFP IFLRSSPNLK SLILERSGSS HQLSRKAMER
VSMSSVPECL LTSLEFVEFK APICGLGPEM MLVWYFLKNS PTLKKLTLPL KSHSTKDDFF
KKLLEIPRCS TECEIVIL