FDL17_ARATH
ID FDL17_ARATH Reviewed; 401 AA.
AC Q9LIR2;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At3g23955;
GN OrderedLocusNames=At3g23955; ORFNames=F14O13.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9LIR2-1; Sequence=Displayed;
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB03013.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP001297; BAB03013.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE76837.1; -; Genomic_DNA.
DR RefSeq; NP_001154642.1; NM_001161170.1. [Q9LIR2-1]
DR AlphaFoldDB; Q9LIR2; -.
DR PRIDE; Q9LIR2; -.
DR EnsemblPlants; AT3G23955.1; AT3G23955.1; AT3G23955. [Q9LIR2-1]
DR GeneID; 3768912; -.
DR Gramene; AT3G23955.1; AT3G23955.1; AT3G23955. [Q9LIR2-1]
DR KEGG; ath:AT3G23955; -.
DR Araport; AT3G23955; -.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9LIR2; -.
DR PhylomeDB; Q9LIR2; -.
DR PRO; PR:Q9LIR2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LIR2; baseline and differential.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..401
FT /note="Putative F-box/FBD/LRR-repeat protein At3g23955"
FT /id="PRO_0000283110"
FT DOMAIN 56..102
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 128..152
FT /note="LRR 1"
FT REPEAT 275..296
FT /note="LRR 2"
FT DOMAIN 321..373
FT /note="FBD"
SQ SEQUENCE 401 AA; 46624 MW; 78A5451ED61A2918 CRC64;
MDHEDVTRRA VEKKNKLASS LIHAPFAICG LCWAFVYQKL IYKQTYTDTH ARNYKVPARF
QLPDPLLTQI LNHLPTEEAV KTSVLSTRWR TLWLWVHNLE LSFSKFSSFN AFLSFGNWFF
DSDRVSCIES LKLSLDGNDA SYLKPWIDAF VKRKIQRLHV RLTQGCEMPL SLYRLVSSCP
VLEELKIDVV WMDGRVYRVH SRSLKSFILT DLESDAKFDI SLRFHKWVFN EAKTSTIHMF
LAWISRVRDM TICAQTFKLI HHYSESVQLP QFGYMSSLYI TLNASDLKWF PIFLRSIPNL
KSLILVMERT GSSHQLSPKA IKRVSISSVP ECLLSSLEFV EFKAPICGLA PEMMLVWYFL
ENSPTLKKLT LRLKSHSTKD DFVKKLLKIP RCSTECEVIF L