FDL18_ARATH
ID FDL18_ARATH Reviewed; 443 AA.
AC Q9SMU0;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At3g49030;
GN OrderedLocusNames=At3g49030; ORFNames=T2J13.130;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9SMU0-1; Sequence=Displayed;
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DR EMBL; AL132967; CAB62007.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78488.1; -; Genomic_DNA.
DR PIR; T46127; T46127.
DR RefSeq; NP_190472.1; NM_114762.1. [Q9SMU0-1]
DR AlphaFoldDB; Q9SMU0; -.
DR iPTMnet; Q9SMU0; -.
DR PaxDb; Q9SMU0; -.
DR PRIDE; Q9SMU0; -.
DR ProteomicsDB; 230769; -. [Q9SMU0-1]
DR EnsemblPlants; AT3G49030.1; AT3G49030.1; AT3G49030. [Q9SMU0-1]
DR GeneID; 824064; -.
DR Gramene; AT3G49030.1; AT3G49030.1; AT3G49030. [Q9SMU0-1]
DR KEGG; ath:AT3G49030; -.
DR Araport; AT3G49030; -.
DR TAIR; locus:2101308; AT3G49030.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q9SMU0; -.
DR OMA; ASPICEV; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9SMU0; -.
DR PRO; PR:Q9SMU0; -.
DR Proteomes; UP000006548; Chromosome 3.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..443
FT /note="Putative F-box/FBD/LRR-repeat protein At3g49030"
FT /id="PRO_0000283111"
FT DOMAIN 20..68
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 74..100
FT /note="LRR 1"
FT REPEAT 152..179
FT /note="LRR 2"
FT REPEAT 180..205
FT /note="LRR 3"
FT REPEAT 218..252
FT /note="LRR 4"
FT REPEAT 272..297
FT /note="LRR 5"
FT REPEAT 320..345
FT /note="LRR 6"
FT DOMAIN 357..408
FT /note="FBD"
SQ SEQUENCE 443 AA; 50820 MW; 86CC747D4F275AA3 CRC64;
MEQQLKTDGL NLSIRDAVKE DRISELPEDL LLQILSDIPT ENVIATSVLS KRWRSLWKMV
PNLTFDFTFD PKYHQTFSEN LYRSLTSHEA SVLESLQLNF TRGIDGLNIG MWIATAYVRH
VRKLVLVSFG DVRDKRARFR SALFNFNDTL DILEIQDYIL LDLPSPVCLK SLRELRLYEV
HFKDEASVCN LLCGCPSLEV LSVHRERNVD VETFTIVVPS LQRLTIYDFC IGGGKGGYVI
NAPSLKYLNI VGFEGLDFCL IENAPELVEA EISDVSHIAN ENILESLTSV KRLSLESPIK
IKFPTGKVFD QLVYLDVLTK EREWWNLLSR MLESSPKLQI LKLTGLSCIE KGLDGQNWNP
PKCVPECLLF HLEKFLWTGY EWQRGDEKEV ATYILENARL LKKATFSTKR IDLENLEKRR
EMLNELASVA RASDSCHLVF HSI
