FDL1_ARATH
ID FDL1_ARATH Reviewed; 416 AA.
AC Q9FZ70; Q7FLD2;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=F-box/FBD/LRR-repeat protein At1g13570;
GN OrderedLocusNames=At1g13570; ORFNames=F13B4.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AC027134; AAF99824.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE29035.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59319.1; -; Genomic_DNA.
DR EMBL; AK118468; BAC43076.2; -; mRNA.
DR EMBL; BT026442; ABH04549.1; -; mRNA.
DR PIR; G86268; G86268.
DR RefSeq; NP_001321685.1; NM_001332072.1.
DR RefSeq; NP_172814.1; NM_101227.3.
DR AlphaFoldDB; Q9FZ70; -.
DR BioGRID; 23158; 10.
DR STRING; 3702.AT1G13570.1; -.
DR PaxDb; Q9FZ70; -.
DR PRIDE; Q9FZ70; -.
DR ProteomicsDB; 230771; -.
DR EnsemblPlants; AT1G13570.1; AT1G13570.1; AT1G13570.
DR EnsemblPlants; AT1G13570.3; AT1G13570.3; AT1G13570.
DR GeneID; 837918; -.
DR Gramene; AT1G13570.1; AT1G13570.1; AT1G13570.
DR Gramene; AT1G13570.3; AT1G13570.3; AT1G13570.
DR KEGG; ath:AT1G13570; -.
DR Araport; AT1G13570; -.
DR TAIR; locus:2010032; AT1G13570.
DR eggNOG; ENOG502RQPH; Eukaryota.
DR HOGENOM; CLU_010721_0_1_1; -.
DR InParanoid; Q9FZ70; -.
DR OMA; EIAFIKF; -.
DR OrthoDB; 531716at2759; -.
DR PhylomeDB; Q9FZ70; -.
DR PRO; PR:Q9FZ70; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FZ70; baseline and differential.
DR Genevisible; Q9FZ70; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..416
FT /note="F-box/FBD/LRR-repeat protein At1g13570"
FT /id="PRO_0000283094"
FT DOMAIN 5..53
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 115..142
FT /note="LRR 1"
FT REPEAT 164..189
FT /note="LRR 2"
FT REPEAT 203..229
FT /note="LRR 3"
FT REPEAT 238..263
FT /note="LRR 4"
FT REPEAT 294..321
FT /note="LRR 5"
FT DOMAIN 346..384
FT /note="FBD"
FT CONFLICT 166
FT /note="L -> P (in Ref. 3; BAC43076)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 416 AA; 47605 MW; 368B5932C5CA5DA3 CRC64;
MGESPDFISD LPQSIIENIL TRLSIRDAIR TSVLSSKWRY KWSTLTDLVF DEKCVSPSND
RCVVETNLVR FITGVLLLHQ GPIHKFQLST SFKQCRPDID QWLLFLSRNG IKELVLKLGE
GEFRVPACLF NCLKLTCLEL CHCEFDPPQY FKGFSYLKSL NLHQILVAPE VIESLISGCP
LLEFLSLSYF DSLVLSISAP NLMYLYLDGE FKDIFLENTP KLVAISVSMY MHEDVTDFEQ
SSDYNLVKFL GGVPLLEKLV GYIYFTKYLS IGDDPGRLPL TYIHLKTIEL YQVCFEDADE
VLVLLRLVTH SPNLKELKVS ASPVQPFPLE EEGFDLFERD YFDYKLPSLE SVKITDASGI
RYELEFIRFL LGTSPVLETV TVSSSLSDKD AKMDMVIELL RYPRVSPRAQ LLFLQD
