FDL20_ARATH
ID FDL20_ARATH Reviewed; 455 AA.
AC Q501E9; Q9SCZ6;
DT 17-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2005, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=F-box/FBD/LRR-repeat protein At3g51530;
GN OrderedLocusNames=At3g51530; ORFNames=F26O13.170;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB63017.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL133452; CAB63017.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE78803.1; -; Genomic_DNA.
DR EMBL; AK229740; BAF01577.1; -; mRNA.
DR EMBL; BT022018; AAY25430.1; -; mRNA.
DR EMBL; BT029216; ABJ17151.1; -; mRNA.
DR PIR; T45784; T45784.
DR RefSeq; NP_190721.3; NM_115012.4.
DR AlphaFoldDB; Q501E9; -.
DR PaxDb; Q501E9; -.
DR PRIDE; Q501E9; -.
DR ProteomicsDB; 231003; -.
DR EnsemblPlants; AT3G51530.1; AT3G51530.1; AT3G51530.
DR GeneID; 824316; -.
DR Gramene; AT3G51530.1; AT3G51530.1; AT3G51530.
DR KEGG; ath:AT3G51530; -.
DR Araport; AT3G51530; -.
DR TAIR; locus:2081880; AT3G51530.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q501E9; -.
DR OMA; RPDWIRE; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q501E9; -.
DR PRO; PR:Q501E9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q501E9; baseline and differential.
DR Genevisible; Q501E9; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..455
FT /note="F-box/FBD/LRR-repeat protein At3g51530"
FT /id="PRO_0000283113"
FT DOMAIN 29..75
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 80..106
FT /note="LRR 1"
FT REPEAT 155..182
FT /note="LRR 2"
FT REPEAT 183..208
FT /note="LRR 3"
FT REPEAT 227..257
FT /note="LRR 4"
FT REPEAT 277..302
FT /note="LRR 5"
FT REPEAT 325..351
FT /note="LRR 6"
FT DOMAIN 370..417
FT /note="FBD"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 455 AA; 52751 MW; 47B21E45C50E616E CRC64;
MKNSERFSAA KPLMEQGGKS SRKPGFMSED RISELPEVLL LQILSSLPTK LVISTSVLSK
RWLSLWKMVQ RLEFESSRNI YDFAENVTRS LLSHKAPVLE SLHLKVGDQF DGVYVGVWAT
IAFTRHVREF VLDLSSYHGP RVRFPTSLFC FDTLETLKLD YVYIYVPCPV SMKSLRTLHL
LSVVYKGDES GHNLFASCPN LEHLVLRRGF FFDAVVNFII DAPSLKTLLL SDPFSARESS
RGYVIKAPSL KYLGIESVEG FEYFLIENVT ELVEANIRNV SKIVNENILG SLKSAKRLSL
DLSPLKITYP TEVMYHQLVY LEMHTHKVEW WNLLTHMLDS SPKLQVLKLI DRETRHENLE
FDKKYKDQGK WNQPKYVPEC LETFMWRNCN WGREEEKEVA TYILRNARQL KKATFSTDPI
EAKRLCKLAK RRKMREELDG VVMTSNSCHL VFEFE
