FDL24_ARATH
ID FDL24_ARATH Reviewed; 441 AA.
AC Q3EAE5; O23070;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At4g00315;
GN OrderedLocusNames=At4g00315; ORFNames=A_IG005I10.18, F5I10.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB62837.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g00315 has been split into 2 genes: At4g00320 and At4g00320.; Evidence={ECO:0000305};
CC Sequence=AAF02795.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g00315 has been split into 2 genes: At4g00320 and At4g00320.; Evidence={ECO:0000305};
CC Sequence=CAB80790.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g00315 has been split into 2 genes: At4g00320 and At4g00320.; Evidence={ECO:0000305};
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DR EMBL; AF013293; AAB62837.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AF195115; AAF02795.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161471; CAB80790.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE81856.1; -; Genomic_DNA.
DR PIR; T01539; T01539.
DR RefSeq; NP_849271.1; NM_178940.1.
DR AlphaFoldDB; Q3EAE5; -.
DR PaxDb; Q3EAE5; -.
DR PRIDE; Q3EAE5; -.
DR EnsemblPlants; AT4G00315.1; AT4G00315.1; AT4G00315.
DR GeneID; 827929; -.
DR Gramene; AT4G00315.1; AT4G00315.1; AT4G00315.
DR KEGG; ath:AT4G00315; -.
DR Araport; AT4G00315; -.
DR TAIR; locus:1005716372; AT4G00315.
DR HOGENOM; CLU_010721_1_2_1; -.
DR OMA; VEVSHGC; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q3EAE5; -.
DR PRO; PR:Q3EAE5; -.
DR Proteomes; UP000006548; Chromosome 4.
DR Genevisible; Q3EAE5; AT.
DR GO; GO:0048579; P:negative regulation of long-day photoperiodism, flowering; IGI:TAIR.
DR GO; GO:0048587; P:regulation of short-day photoperiodism, flowering; IGI:TAIR.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..441
FT /note="Putative F-box/FBD/LRR-repeat protein At4g00315"
FT /id="PRO_0000274960"
FT DOMAIN 1..47
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 57..82
FT /note="LRR 1"
FT REPEAT 87..115
FT /note="LRR 2"
FT REPEAT 137..164
FT /note="LRR 3"
FT REPEAT 165..190
FT /note="LRR 4"
FT REPEAT 211..236
FT /note="LRR 5"
FT REPEAT 243..271
FT /note="LRR 6"
FT REPEAT 293..318
FT /note="LRR 7"
FT REPEAT 319..344
FT /note="LRR 8"
FT DOMAIN 358..410
FT /note="FBD"
SQ SEQUENCE 441 AA; 50951 MW; EF350A3300B6055D CRC64;
MDKTSQLPDE LLVKVLSFLP TKDAVRTSLL SMRWKSLWMW LPKLEYDFRH YSVSEGQGLA
RFITLSLLGH KAPAIESLSL KLRYGAIGSI KPEDIYLWVS LAVHDSNVRE LSLKLCTFAE
RPTKLPKSLY KCKSIVILKL KDEILVDVPR KVCLPSLKTL FLGRVTYSDE DSLHRLLSNC
PVLEDLVVER DRIDNLGKLS VVVKSLQRLT LKMSCPCHLD GIMMNTPSLK YLKVTDERQE
SDSDNESDSD SPRYFYDFED MPKLEEADFV LTFQNIKKFF KFVTSIKRLS LCLGVYTEES
LYHEGLVFNQ LEQLKICSCD SDWSILLSRL LESSPNLREL EAYVIEDHPD RRVDLPNQWG
NQLNCVPKCL LSSLETFKWS EMYGLLQNQM DVAKYILRNA RCLKSATIFF PTTYAKETRD
EMIEELSLSF QGPETCQVFF H
