FDL28_ARATH
ID FDL28_ARATH Reviewed; 431 AA.
AC Q9STQ0;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At4g26350;
GN OrderedLocusNames=At4g26350; ORFNames=T25K17.160;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AL049171; CAB38964.1; -; Genomic_DNA.
DR EMBL; AL161565; CAB79490.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE85188.1; -; Genomic_DNA.
DR PIR; T06019; T06019.
DR RefSeq; NP_194365.1; NM_118768.1.
DR AlphaFoldDB; Q9STQ0; -.
DR PaxDb; Q9STQ0; -.
DR PRIDE; Q9STQ0; -.
DR EnsemblPlants; AT4G26350.1; AT4G26350.1; AT4G26350.
DR GeneID; 828741; -.
DR Gramene; AT4G26350.1; AT4G26350.1; AT4G26350.
DR KEGG; ath:AT4G26350; -.
DR Araport; AT4G26350; -.
DR TAIR; locus:2136844; AT4G26350.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q9STQ0; -.
DR OMA; LEISINC; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9STQ0; -.
DR PRO; PR:Q9STQ0; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9STQ0; baseline.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..431
FT /note="Putative F-box/FBD/LRR-repeat protein At4g26350"
FT /id="PRO_0000283120"
FT DOMAIN 1..47
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 52..78
FT /note="LRR 1"
FT REPEAT 85..109
FT /note="LRR 2"
FT REPEAT 132..159
FT /note="LRR 3"
FT REPEAT 160..185
FT /note="LRR 4"
FT REPEAT 309..334
FT /note="LRR 5"
FT DOMAIN 348..398
FT /note="FBD"
SQ SEQUENCE 431 AA; 49656 MW; 7BCD80DDA9121640 CRC64;
MDIISQCPDH LLLRILSFIP TKDVIVTSLL SKRWGSLWRW VPKLEYDFTR QNMRFVKFVY
RSLLQNNAPV LESLHLKNII LYAECRTVDI GGWIDIAVSR RVRELEISIN CSDEKFRLPS
SLYTCGTLES FILTIKHCHL VDVPLAVCLP SLKKLHLRCI GWAYNATLLR LISGCTNLEE
LRLARPDDDG DYIMIHEAGS TIDYMSIFER RYMFEFMFDQ MFGKGSSNGI NAPLKYFSIS
NNYRIHNFRG IEKMPDWVEA RIAVTGGSHK YLKEITYAKG LYVCLSVSEV MNPYDMIFHM
LVDLTICTCT QGWWDLLTHM LQGSPKLRFL TLTNDHCREL PSLETPACWK RPSSVPACLL
SSLQAFTWSG YKGRQGDKEV VKYVLRNATG LKKRIFISKS NDFGEKFCML QELASVPTPS
PSCQLLFDRI F
