FDL33_ARATH
ID FDL33_ARATH Reviewed; 481 AA.
AC Q3E944;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At5g25850;
GN OrderedLocusNames=At5g25850; ORFNames=F18A17.100;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC005405; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED93494.1; -; Genomic_DNA.
DR RefSeq; NP_197957.1; NM_122486.1.
DR AlphaFoldDB; Q3E944; -.
DR PaxDb; Q3E944; -.
DR PRIDE; Q3E944; -.
DR EnsemblPlants; AT5G25850.1; AT5G25850.1; AT5G25850.
DR GeneID; 832654; -.
DR Gramene; AT5G25850.1; AT5G25850.1; AT5G25850.
DR KEGG; ath:AT5G25850; -.
DR Araport; AT5G25850; -.
DR TAIR; locus:2145279; AT5G25850.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q3E944; -.
DR OMA; CASILQW; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q3E944; -.
DR PRO; PR:Q3E944; -.
DR Proteomes; UP000006548; Chromosome 5.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..481
FT /note="Putative F-box/FBD/LRR-repeat protein At5g25850"
FT /id="PRO_0000283125"
FT DOMAIN 19..69
FT /note="F-box"
FT REPEAT 123..151
FT /note="LRR 1"
FT REPEAT 173..198
FT /note="LRR 2"
FT REPEAT 328..356
FT /note="LRR 3"
FT DOMAIN 401..452
FT /note="FBD"
SQ SEQUENCE 481 AA; 56119 MW; C78BCA8B3F612DDE CRC64;
MMGRKNSKQV RYSNRLILIN RLSQLSDPLI CQILSHLPIK EVVTTSVLST RWKNIWLSVP
SLELIYSIFP NFNTFRSFGD RFFDSTRVSC IHNLKLYFDE HDACYLTSWI NAFVTRNIRR
LYVRRVRGNY FHELPLSLYV CETLVSLKLF HLTLVDPEFV SLPCLKIMHL NYVWFPNDAT
FERLVSSCPV LEDLKIDVLW NDGRVYRVKS RSLKRLRLLR SSTMVFDSVP GVVIDAPLIC
YLRINDRVSE TYILNDLESN AKLDIHLDFG SEDFGEPSVS SRRSRIRSFL PAISKVMGLK
ISENTFKVIH HYSNLAQLPQ FDNTSRLHVT LRVSELKWLP NFLECCPNLK SLIVAFNGDF
EKMGSEEMNQ ISFLLRMKRI VDMTIFMYTS KVLLHSDNIN QLSFSSVPKC LLSSLQFVEL
NAQILRFDGE ILNLAKYFLE NSSILQKLTL HPNKYGSTYA NMLHKFRRRS RTCQFILTDL
E