FDL36_ARATH
ID FDL36_ARATH Reviewed; 435 AA.
AC Q9FL99;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=F-box/FBD/LRR-repeat protein At5g44980;
GN OrderedLocusNames=At5g44980; ORFNames=K21C13.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
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DR EMBL; AB010693; BAB10881.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95183.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM68695.1; -; Genomic_DNA.
DR EMBL; BT004298; AAO42296.1; -; mRNA.
DR EMBL; BT005527; AAO63947.1; -; mRNA.
DR RefSeq; NP_001330423.1; NM_001344578.1.
DR RefSeq; NP_199311.1; NM_123866.3.
DR AlphaFoldDB; Q9FL99; -.
DR BioGRID; 19778; 2.
DR STRING; 3702.AT5G44980.1; -.
DR iPTMnet; Q9FL99; -.
DR PaxDb; Q9FL99; -.
DR PRIDE; Q9FL99; -.
DR ProteomicsDB; 230493; -.
DR EnsemblPlants; AT5G44980.1; AT5G44980.1; AT5G44980.
DR EnsemblPlants; AT5G44980.2; AT5G44980.2; AT5G44980.
DR GeneID; 834529; -.
DR Gramene; AT5G44980.1; AT5G44980.1; AT5G44980.
DR Gramene; AT5G44980.2; AT5G44980.2; AT5G44980.
DR KEGG; ath:AT5G44980; -.
DR Araport; AT5G44980; -.
DR TAIR; locus:2155367; AT5G44980.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9FL99; -.
DR OMA; QIYLSEY; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9FL99; -.
DR PRO; PR:Q9FL99; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL99; baseline and differential.
DR Genevisible; Q9FL99; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..435
FT /note="F-box/FBD/LRR-repeat protein At5g44980"
FT /id="PRO_0000283128"
FT DOMAIN 3..49
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 88..114
FT /note="LRR 1"
FT REPEAT 138..162
FT /note="LRR 2"
FT REPEAT 165..190
FT /note="LRR 3"
FT REPEAT 191..217
FT /note="LRR 4"
FT REPEAT 250..275
FT /note="LRR 5"
FT REPEAT 324..349
FT /note="LRR 6"
FT DOMAIN 355..405
FT /note="FBD"
SQ SEQUENCE 435 AA; 50996 MW; EF6BB0D5A0F0F54B CRC64;
MDRDYISELP DSLLTQILLE LRTKDSVKTS VLSKRWRNLW LNVPGLELFT LQFTYPDREE
IFVRFMDRFM EFKCRSRLKK FMITYVDCKG YRDRLMELIG TLVDHGLQHL YVFMHTFDRV
DFKRQNIYKS KTLVSLKLHN VELKNSDFVV SLPCLKILKL ENICHGEDGP LVVEKLISGC
SVLEDLELIR PFDIRTHKVL LLLRVSSQTL KSFTLHFAIY KDRTDFSVEI DAPRLKYMTV
EQSQSDSIVV KNLSSLFSID IGTKFNPLRH EDLRMRNVFY DFLTGISSVK HMIICLWSLQ
RFSPYSKPGL IPKFQNLYHL KAQMWSSSTH LLEAFLESCP NLKNLILEYN VELDREQVDF
TNVPQCLIST LEYVEIKEPN EKSTIKLVNY FLENSAVLKK LTLRFSYSSS IYLKSYKKLL
TSTKLSPTCQ VIFGC