FDL37_ARATH
ID FDL37_ARATH Reviewed; 444 AA.
AC Q9FGQ3;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=F-box/FBD/LRR-repeat protein At5g53840;
GN OrderedLocusNames=At5g53840; ORFNames=K6O8.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AB025616; BAB10069.1; -; Genomic_DNA.
DR EMBL; AB007644; BAB10069.1; JOINED; Genomic_DNA.
DR EMBL; CP002688; AED96412.1; -; Genomic_DNA.
DR EMBL; DQ056719; AAY78864.1; -; mRNA.
DR RefSeq; NP_568800.1; NM_124763.1.
DR AlphaFoldDB; Q9FGQ3; -.
DR BioGRID; 20709; 1.
DR STRING; 3702.AT5G53840.1; -.
DR PaxDb; Q9FGQ3; -.
DR PRIDE; Q9FGQ3; -.
DR EnsemblPlants; AT5G53840.1; AT5G53840.1; AT5G53840.
DR GeneID; 835465; -.
DR Gramene; AT5G53840.1; AT5G53840.1; AT5G53840.
DR KEGG; ath:AT5G53840; -.
DR Araport; AT5G53840; -.
DR TAIR; locus:2157922; AT5G53840.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9FGQ3; -.
DR OMA; WIDSAIT; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9FGQ3; -.
DR PRO; PR:Q9FGQ3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FGQ3; baseline and differential.
DR Genevisible; Q9FGQ3; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..444
FT /note="F-box/FBD/LRR-repeat protein At5g53840"
FT /id="PRO_0000283129"
FT DOMAIN 17..63
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 103..123
FT /note="LRR 1"
FT REPEAT 124..150
FT /note="LRR 2"
FT REPEAT 151..171
FT /note="LRR 3"
FT REPEAT 172..197
FT /note="LRR 4"
FT REPEAT 199..224
FT /note="LRR 5"
FT REPEAT 226..252
FT /note="LRR 6"
FT REPEAT 273..299
FT /note="LRR 7"
FT REPEAT 300..321
FT /note="LRR 8"
FT REPEAT 322..347
FT /note="LRR 9"
FT DOMAIN 356..408
FT /note="FBD"
FT REPEAT 369..396
FT /note="LRR 10"
FT REPEAT 398..423
FT /note="LRR 11"
SQ SEQUENCE 444 AA; 50907 MW; 712E7F2A987C3125 CRC64;
MVKTEICGKG SSQGSEEERL SQLPDHLICV ILSHLSTKDA VRTSILSTRW RNLWQLVPVL
DFDSRELRSF SEFVSFAGSF FYLHKDSYIQ KLRVCIYDLA GNYYLTSWID LVTRHRIQHI
DISVFTCSGF GVIPLSLYTC DTLVHLKLSR VTMVNVEFVS LPCLKILDLD FVNFTNETTL
DKIISCSPVL EELTIVKSSE DNVKIIQVRS QTLKRVEIHR RFDRHNGLVI DTPLLQFLSI
KAHSIKSIEF INLGFTTKVD IDVNLLDPND LSNRSMTRDF FTTISRVRSL VIRHGTIKDI
FHYMELEPLQ QFCYLSELSA VCSISNLEML LNLLKSCPKL ESLSLKLVDY EKNKKEEVMS
STVPPPCLVS SLKFVKLESQ LLGCGTELKV ARYFLENSTI LEKLTLKIDY MYKDEANVNH
IRQTLHAVPR CSSTCEVVIH SLLY
