FDL42_ARATH
ID FDL42_ARATH Reviewed; 376 AA.
AC Q9FHB5; F4KG70;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At5g52460;
DE AltName: Full=Protein EMBRYO SAC DEVELOPMENT ARREST 41;
GN Name=EDA41; OrderedLocusNames=At5g52460; ORFNames=K24M7.21;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SEQUENCE CAUTION:
CC Sequence=AED96216.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAB10543.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB019226; BAB10543.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED96216.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; NP_200059.2; NM_124625.2.
DR AlphaFoldDB; Q9FHB5; -.
DR STRING; 3702.AT5G52460.1; -.
DR PRIDE; Q9FHB5; -.
DR GeneID; 835322; -.
DR KEGG; ath:AT5G52460; -.
DR Araport; AT5G52460; -.
DR HOGENOM; CLU_010721_1_2_1; -.
DR InParanoid; Q9FHB5; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9FHB5; -.
DR PRO; PR:Q9FHB5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FHB5; differential.
DR Genevisible; Q9FHB5; AT.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..376
FT /note="Putative F-box/FBD/LRR-repeat protein At5g52460"
FT /id="PRO_0000281986"
FT DOMAIN 16..75
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 131..154
FT /note="LRR 1"
FT REPEAT 199..224
FT /note="LRR 2"
FT DOMAIN 296..348
FT /note="FBD"
SQ SEQUENCE 376 AA; 43123 MW; 107F50DD165EDCDF CRC64;
MAERCQRIDE EVVASRDEIS SLPDDLLIQI LLLVPIKDAV GTMILSKRWR YVWTLLPKLE
YSDPGDECES VWKFLEKLLE LHKAPFLETL CIQLDVGKLV ANAVDRFVRK LELELHWTAE
PTSLPKSLYT CKTLVELTLS DKIIVDVPSS VCLPSLNILR LFYVVFKDEN SLERLISSCS
VLARSKVGLA ISDNRDYRFA KVHKLRLEKP HIDVVCHTDD KFLKAISLVT YLVLPLEDPM
ALDFRGFTFT RLGKLVICPH GHLWLDIIPL ILNNSPKLRF LAITSVMDID PEISHCHGTN
QGTVPRCLSA HLDEEFVWHG YRGNEEETQL IRYIFANAKC LKKREISTFH LEEREVIETV
LKSMPRVSTT STLVFK