FDL47_ARATH
ID FDL47_ARATH Reviewed; 437 AA.
AC Q9FNJ1; C0SVQ1;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 03-APR-2007, sequence version 2.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=F-box/FBD/LRR-repeat protein At5g22700;
GN OrderedLocusNames=At5g22700; ORFNames=MDJ22.12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9405937; DOI=10.1093/dnares/4.4.291;
RA Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence
RT features of the regions of 1,044,062 bp covered by thirteen physically
RT assigned P1 clones.";
RL DNA Res. 4:291-300(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB11676.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAH30592.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AB006699; BAB11676.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED93065.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM71010.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM71012.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM71013.1; -; Genomic_DNA.
DR EMBL; AB493754; BAH30592.1; ALT_INIT; mRNA.
DR RefSeq; NP_001318621.1; NM_001343750.1.
DR RefSeq; NP_001332571.1; NM_001343753.1.
DR RefSeq; NP_001332573.1; NM_001343752.1.
DR RefSeq; NP_001332574.1; NM_001343751.1.
DR AlphaFoldDB; Q9FNJ1; -.
DR iPTMnet; Q9FNJ1; -.
DR PaxDb; Q9FNJ1; -.
DR PRIDE; Q9FNJ1; -.
DR EnsemblPlants; AT5G22700.1; AT5G22700.1; AT5G22700.
DR EnsemblPlants; AT5G22700.2; AT5G22700.2; AT5G22700.
DR EnsemblPlants; AT5G22700.3; AT5G22700.3; AT5G22700.
DR EnsemblPlants; AT5G22700.4; AT5G22700.4; AT5G22700.
DR GeneID; 832335; -.
DR Gramene; AT5G22700.1; AT5G22700.1; AT5G22700.
DR Gramene; AT5G22700.2; AT5G22700.2; AT5G22700.
DR Gramene; AT5G22700.3; AT5G22700.3; AT5G22700.
DR Gramene; AT5G22700.4; AT5G22700.4; AT5G22700.
DR KEGG; ath:AT5G22700; -.
DR Araport; AT5G22700; -.
DR TAIR; locus:2162454; AT5G22700.
DR eggNOG; ENOG502T0EG; Eukaryota.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q9FNJ1; -.
DR PhylomeDB; Q9FNJ1; -.
DR PRO; PR:Q9FNJ1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FNJ1; baseline and differential.
DR Genevisible; Q9FNJ1; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..437
FT /note="F-box/FBD/LRR-repeat protein At5g22700"
FT /id="PRO_0000281979"
FT DOMAIN 5..51
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 86..113
FT /note="LRR 1"
FT REPEAT 134..160
FT /note="LRR 2"
FT REPEAT 161..186
FT /note="LRR 3"
FT REPEAT 187..210
FT /note="LRR 4"
FT REPEAT 215..240
FT /note="LRR 5"
FT REPEAT 272..297
FT /note="LRR 6"
FT REPEAT 322..350
FT /note="LRR 7"
FT DOMAIN 361..406
FT /note="FBD"
SQ SEQUENCE 437 AA; 50371 MW; AFD185B205939348 CRC64;
MSNRGDRISS LPDELLCQIL SNLPTKNAVT TSILSTRWRS IWLSTPVLDI DIDAFDDATT
FVSFASRFLE FSKDSCLHKF KLSVERDDVD MCTIMPWIQD AVNRRIQHLE VDCRFSFHFE
AVYLTLYLSE TLVSLRLHFV TLHRYEFVSL PNLKVMHLEE NIYYCLETLE NFISSCPVLE
DLTVVRIVDI ITEKILRVRS RSLNSLKLVL DSSNGWFIDD IDEWKVIIDA PRLAYLSLKD
DQSASFVISN LGSSAKADIK VSFNVNDIWD LPVTFERSNV GKLLTGLSSI RDLTISGTTL
MIICHYLKHE PMPQFCNMVR LNARFYDCDL EMLPCVLESC PNLKSLVLGL LSSAETEQQS
RVSSVPPCFL SSLEFVEIRS RLCRKRYVMK VARYFAKNSV MLKKFVYVGR VSIQEEDLLA
LLWRYSICEI EVRGLRR