FDL5_ARATH
ID FDL5_ARATH Reviewed; 465 AA.
AC Q9LM63; F4HZS1;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Putative F-box/FBD/LRR-repeat protein At1g22000;
GN OrderedLocusNames=At1g22000; ORFNames=F2E2.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC069252; AAF86543.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30183.2; -; Genomic_DNA.
DR RefSeq; NP_173619.3; NM_102049.3.
DR AlphaFoldDB; Q9LM63; -.
DR PaxDb; Q9LM63; -.
DR PRIDE; Q9LM63; -.
DR ProteomicsDB; 230503; -.
DR EnsemblPlants; AT1G22000.1; AT1G22000.1; AT1G22000.
DR GeneID; 838803; -.
DR Gramene; AT1G22000.1; AT1G22000.1; AT1G22000.
DR KEGG; ath:AT1G22000; -.
DR Araport; AT1G22000; -.
DR HOGENOM; CLU_385601_0_0_1; -.
DR InParanoid; Q9LM63; -.
DR OMA; WRINERT; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q9LM63; -.
DR PRO; PR:Q9LM63; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LM63; baseline.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..465
FT /note="Putative F-box/FBD/LRR-repeat protein At1g22000"
FT /id="PRO_0000283098"
FT DOMAIN 28..74
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 154..181
FT /note="LRR 1"
FT REPEAT 182..207
FT /note="LRR 2"
FT REPEAT 210..230
FT /note="LRR 3"
FT REPEAT 248..273
FT /note="LRR 4"
FT REPEAT 339..365
FT /note="LRR 5"
FT DOMAIN 373..424
FT /note="FBD"
SQ SEQUENCE 465 AA; 53249 MW; 320CCE9F6C145427 CRC64;
MSFLWDIMPI DKHLSTVPET EGCQQRIETR ICALPDDLLL QILPHVPTKE AVATSILSKQ
WRYVWLMLPK LEFKDEGSES VGWFIKKSLQ LHKAPKLDCL IVELGPHCPI DVDVRKWVEN
AVNRDVKDLD FTLLWSAAPT SFPKSLYTCD TLVCLTLSNQ ILVDVSSPAS LPSLLDLSLH
YVVYKDDGSL VRLLSSSPVL KRLSVHSHED DNLKTFTVKV SSLESLNYDE NWLKDEVEDN
EVDEVVDNEV EVDDLNGSLV IDSPALKELH LSEVWDYCLI ENMSFLDEAF ISNVPYPDEK
FLRSLSSVKH LFLLFSKSMV ACCNAIKFSW LIEFYFFPIS LVDWLMPLMF LLQNSPKLKT
PTIDNDFECL SLSWNQPSSI PGCLLSHLET FRWRGYGGRE DAKKLLMTYI LANSKCLKTV
EISLLATCNL EETQKELKSM PRISQSSQLL ISTKKLWRIN ERTYL