FDL6_ARATH
ID FDL6_ARATH Reviewed; 435 AA.
AC Q6DBN6; Q3ECS4;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=F-box/FBD/LRR-repeat protein At1g51370;
GN OrderedLocusNames=At1g51370; ORFNames=F11M15.27;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q6DBN6-1; Sequence=Displayed;
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC006085; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002684; AEE32658.1; -; Genomic_DNA.
DR EMBL; BT014986; AAT70437.1; -; mRNA.
DR EMBL; BT015850; AAU94413.1; -; mRNA.
DR EMBL; AK228894; BAF00784.1; -; mRNA.
DR RefSeq; NP_175548.4; NM_104015.4. [Q6DBN6-1]
DR AlphaFoldDB; Q6DBN6; -.
DR BioGRID; 26786; 1.
DR IntAct; Q6DBN6; 1.
DR PaxDb; Q6DBN6; -.
DR PRIDE; Q6DBN6; -.
DR ProteomicsDB; 230504; -. [Q6DBN6-1]
DR EnsemblPlants; AT1G51370.1; AT1G51370.1; AT1G51370. [Q6DBN6-1]
DR GeneID; 841561; -.
DR Gramene; AT1G51370.1; AT1G51370.1; AT1G51370. [Q6DBN6-1]
DR KEGG; ath:AT1G51370; -.
DR Araport; AT1G51370; -.
DR TAIR; locus:2008276; AT1G51370.
DR InParanoid; Q6DBN6; -.
DR OMA; RYEGEME; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q6DBN6; -.
DR PRO; PR:Q6DBN6; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q6DBN6; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00579; FBD; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..435
FT /note="F-box/FBD/LRR-repeat protein At1g51370"
FT /id="PRO_0000283099"
FT DOMAIN 18..64
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 123..148
FT /note="LRR 1"
FT REPEAT 170..195
FT /note="LRR 2"
FT REPEAT 234..259
FT /note="LRR 3"
FT REPEAT 262..287
FT /note="LRR 4"
FT REPEAT 314..340
FT /note="LRR 5"
FT DOMAIN 354..406
FT /note="FBD"
SQ SEQUENCE 435 AA; 50488 MW; 40CF1D9B03B80FBD CRC64;
MVGGKKKTKI CDKVSHEEDR ISQLPEPLIS EILFHLSTKD SVRTSALSTK WRYLWQSVPG
LDLDPYASSN TNTIVSFVES FFDSHRDSWI RKLRLDLGYH HDKYDLMSWI DAATTRRIQH
LDVHCFHDNK IPLSIYTCTT LVHLRLRWAV LTNPEFVSLP CLKIMHFENV SYPNETTLQK
LISGSPVLEE LILFSTMYPK GNVLQLRSDT LKRLDINEFI DVVIYAPLLQ CLRAKMYSTK
NFQIISSGFP AKLDIDFVNT GGRYQKKKVI EDILIDISRV RDLVISSNTW KEFFLYSKSR
PLLQFRYISH LNARFYISDL EMLPTLLESC PKLESLILEM VKNQSTRRHG EKREPNVMVS
TVPWCLVSSL KFVELKRSIP RYEGEMELVR YVLTNSTVLK KLRLNVYYTK KAKCAFLTEL
VAIPRCSSTC VVLVL
