FER_MEGGA
ID FER_MEGGA Reviewed; 58 AA.
AC P00209;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1990, sequence version 2.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Ferredoxin-2;
DE AltName: Full=Ferredoxin II;
DE Short=FdII;
OS Megalodesulfovibrio gigas (Desulfovibrio gigas).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;
OC Desulfovibrionaceae; Megalodesulfovibrio.
OX NCBI_TaxID=879;
RN [1]
RP PROTEIN SEQUENCE.
RX PubMed=518659; DOI=10.1016/0006-291x(79)91567-5;
RA Bruschi M.;
RT "Amino acid sequence of Desulfovibrio gigas ferredoxin: revisions.";
RL Biochem. Biophys. Res. Commun. 91:623-628(1979).
RN [2]
RP PROTEIN SEQUENCE.
RX PubMed=4946273; DOI=10.1016/0006-291x(71)90840-0;
RA Travis J., Newman D.J., le Gall J., Peck H.D. Jr.;
RT "The amino acid sequence of ferredoxin from the sulfate reducing bacterium,
RT Desulfovibrio gigas.";
RL Biochem. Biophys. Res. Commun. 45:452-458(1971).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (1.7 ANGSTROMS), SEQUENCE REVISION, METHYLTHIOLATION
RP AT CYS-11, AND DISULFIDE BOND.
RX PubMed=2920839; DOI=10.1016/0014-5793(89)80580-0;
RA Kissinger C.R., Adman E.T., Sieker L.C., Jensen L.H., le Gall J.;
RT "The crystal structure of the three-iron ferredoxin II from Desulfovibrio
RT gigas.";
RL FEBS Lett. 244:447-450(1989).
RN [4]
RP X-RAY CRYSTALLOGRAPHY (1.7 ANGSTROMS).
RX PubMed=2056535; DOI=10.1016/0022-2836(91)90665-s;
RA Kissinger C.R., Sieker L.C., Adman E.T., Jensen L.H.;
RT "Refined crystal structure of ferredoxin II from Desulfovibrio gigas at 1.7
RT A.";
RL J. Mol. Biol. 219:693-715(1991).
RN [5]
RP STRUCTURE BY NMR.
RX PubMed=10555576; DOI=10.1007/s007750050328;
RA Goodfellow B.J., Macedo A.L., Rodrigues P., Moura I., Wray V., Moura J.J.;
RT "The solution structure of a [3Fe-4S] ferredoxin: oxidised ferredoxin II
RT from Desulfovibrio gigas.";
RL J. Biol. Inorg. Chem. 4:421-430(1999).
CC -!- FUNCTION: Ferredoxins are iron-sulfur proteins that transfer electrons
CC in a wide variety of metabolic reactions.
CC -!- COFACTOR:
CC Name=[3Fe-4S] cluster; Xref=ChEBI:CHEBI:21137;
CC Note=Binds 1 [3Fe-4S] cluster in its tetrameric form.;
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Note=Binds 1 [4Fe-4S] cluster in its dimeric form.;
CC -!- SUBUNIT: Homodimer (ferredoxin I) or homotetramer (ferredoxin II).
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DR PIR; S48666; FEDVFG.
DR PDB; 1F2G; NMR; -; A=1-58.
DR PDB; 1FXD; X-ray; 1.70 A; A=1-58.
DR PDBsum; 1F2G; -.
DR PDBsum; 1FXD; -.
DR AlphaFoldDB; P00209; -.
DR SMR; P00209; -.
DR EvolutionaryTrace; P00209; -.
DR GO; GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR InterPro; IPR001080; 3Fe4S_ferredoxin.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR PRINTS; PR00352; 3FE4SFRDOXIN.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 2.
PE 1: Evidence at protein level;
KW 3D-structure; 3Fe-4S; Direct protein sequencing; Disulfide bond;
KW Electron transport; Iron; Iron-sulfur; Metal-binding; Methylation; Repeat;
KW Transport.
FT CHAIN 1..58
FT /note="Ferredoxin-2"
FT /id="PRO_0000159195"
FT DOMAIN 2..27
FT /note="4Fe-4S ferredoxin-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00711"
FT DOMAIN 30..58
FT /note="4Fe-4S ferredoxin-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00711"
FT BINDING 8
FT /ligand="[3Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:21137"
FT BINDING 14
FT /ligand="[3Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:21137"
FT BINDING 50
FT /ligand="[3Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:21137"
FT MOD_RES 11
FT /note="Cysteine methyl disulfide"
FT /evidence="ECO:0000269|PubMed:2920839"
FT DISULFID 18..42
FT /evidence="ECO:0000269|PubMed:2920839"
FT STRAND 2..4
FT /evidence="ECO:0007829|PDB:1FXD"
FT TURN 5..7
FT /evidence="ECO:0007829|PDB:1F2G"
FT HELIX 13..17
FT /evidence="ECO:0007829|PDB:1FXD"
FT TURN 19..21
FT /evidence="ECO:0007829|PDB:1FXD"
FT STRAND 22..24
FT /evidence="ECO:0007829|PDB:1FXD"
FT STRAND 26..34
FT /evidence="ECO:0007829|PDB:1FXD"
FT HELIX 41..49
FT /evidence="ECO:0007829|PDB:1FXD"
FT STRAND 55..57
FT /evidence="ECO:0007829|PDB:1FXD"
SQ SEQUENCE 58 AA; 6262 MW; A479B524E828CD71 CRC64;
PIEVNDDCMA CEACVEICPD VFEMNEEGDK AVVINPDSDL DCVEEAIDSC PAEAIVRS