FIMD_SALTY
ID FIMD_SALTY Reviewed; 870 AA.
AC P37924;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2002, sequence version 2.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Outer membrane usher protein FimD;
DE Flags: Precursor;
GN Name=fimD; OrderedLocusNames=STM0546;
OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=99287;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Swenson D.L., Clegg S.;
RT "The complete nucleotide sequence of a Salmonella typhimurium type 1
RT fimbrial gene cluster.";
RL Submitted (JUN-1993) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LT2 / SGSC1412 / ATCC 700720;
RX PubMed=11677609; DOI=10.1038/35101614;
RA McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P.,
RA Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D.,
RA Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E.,
RA Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R.,
RA Wilson R.K.;
RT "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
RL Nature 413:852-856(2001).
CC -!- FUNCTION: Involved in the export and assembly of FimA fimbrial subunits
CC across the outer membrane.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the fimbrial export usher family. {ECO:0000305}.
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DR EMBL; L19338; AAA75419.1; -; Genomic_DNA.
DR EMBL; AE006468; AAL19500.1; -; Genomic_DNA.
DR RefSeq; NP_459541.1; NC_003197.2.
DR RefSeq; WP_000754233.1; NC_003197.2.
DR AlphaFoldDB; P37924; -.
DR SMR; P37924; -.
DR STRING; 99287.STM0546; -.
DR PaxDb; P37924; -.
DR PRIDE; P37924; -.
DR EnsemblBacteria; AAL19500; AAL19500; STM0546.
DR GeneID; 1252066; -.
DR KEGG; stm:STM0546; -.
DR PATRIC; fig|99287.12.peg.579; -.
DR HOGENOM; CLU_009120_3_1_6; -.
DR OMA; GELLIQW; -.
DR PhylomeDB; P37924; -.
DR BioCyc; SENT99287:STM0546-MON; -.
DR Proteomes; UP000001014; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0015473; F:fimbrial usher porin activity; IBA:GO_Central.
DR GO; GO:0009297; P:pilus assembly; IBA:GO_Central.
DR Gene3D; 2.60.40.2070; -; 1.
DR Gene3D; 2.60.40.2610; -; 1.
DR Gene3D; 3.10.20.410; -; 1.
DR InterPro; IPR000015; Fimb_usher.
DR InterPro; IPR018030; Fimbrial_membr_usher_CS.
DR InterPro; IPR042186; FimD_plug_dom.
DR InterPro; IPR025949; PapC-like_C.
DR InterPro; IPR043142; PapC-like_C_sf.
DR InterPro; IPR025885; PapC_N.
DR InterPro; IPR037224; PapC_N_sf.
DR PANTHER; PTHR30451; PTHR30451; 1.
DR Pfam; PF13953; PapC_C; 1.
DR Pfam; PF13954; PapC_N; 1.
DR Pfam; PF00577; Usher; 1.
DR SUPFAM; SSF141729; SSF141729; 1.
DR PROSITE; PS01151; FIMBRIAL_USHER; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Disulfide bond; Fimbrium biogenesis; Membrane;
KW Reference proteome; Signal; Transmembrane; Transmembrane beta strand;
KW Transport.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..870
FT /note="Outer membrane usher protein FimD"
FT /id="PRO_0000009314"
FT DISULFID 843..865
FT /evidence="ECO:0000255"
FT CONFLICT 265
FT /note="V -> F (in Ref. 1; AAA75419)"
FT /evidence="ECO:0000305"
FT CONFLICT 361
FT /note="G -> A (in Ref. 1; AAA75419)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 870 AA; 95128 MW; A6B000139F654A29 CRC64;
MKKTTWFAGR FPGYVSPLSS VALSVLAALC PLTSRGESYF NPAFLSADTA SVADLSRFEK
GNHQPPGIYR VDIWRNDEFV ATQDIRFEAG AVGTGDKSGG LMPCFTPEWI KRLGVNTAAF
PVSDKGVDTT CIHLPEKIPG AEVAFDFASM RLNISLPQAS LLNSARGYIP PEEWDEGIPA
ALINYSFTGS RGTDSDSYFL SLLSGLNYGP WRLRNNGAWN YSKGDGYHSQ RWNNIGTWVQ
RAIIPLKSEL VMGDSNTGND VFDSVGFRGA RLYSSDNMYP DSLQGYAPTV RGIARTAAKL
TIRQNGYVIY QSYVSPGAFA ITDLNPTSSS GDLEVTVDEK DGSQQRYTVP YSTVPLLQRE
GRVKYDLVAG DFRSGNSQQS SPFFFQGTVI AGLPAGLTAY GGTQLADRYR AVVVGAGRNL
GDWGAVSVDV THARSQLADD STHQGQSLRF LYAKSLNNYG TNFQLLGYRY STRGFYTLDD
VAYRSMEGYD YEYDSDGRRH KVPVAQSYHN LRYSKKGRFQ VNISQNLGDY GSLYLSGSQQ
NYWNTADTNT WYQLGYASGW QGISYSLSWS WSESVGSSGA DRILAFNMSV PFSVLTGRRY
ARDTILDRTY ATFNANRNRD GDNSWQTGVG GTLLEGRNLS YSVTQGRSSS NGYSGSASAS
WQATYGTLGV GYNYDRDQHD YNWQLSGGVV GHADGITFSQ PLGDTNVLIK APGAKGVRIE
NQTGVKTDWR GYAVMPYATV YRYNRVALDT NTMDNHTDVE NNVSSVVPTE GALVRAAFDT
RIGVRAIITA RLGGRPLPFG AIVRETASGI TSMVGDDGQI YLSGLPLKGE LFIQWGEGKN
ARCIAPYALA EDSLKQAITI ASATCIRPAS