FIP1_DEBHA
ID FIP1_DEBHA Reviewed; 328 AA.
AC Q6BGR9;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 25-MAY-2022, entry version 71.
DE RecName: Full=Pre-mRNA polyadenylation factor FIP1;
GN Name=FIP1; OrderedLocusNames=DEHA2G24398g;
OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990
OS / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX NCBI_TaxID=284592;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Pre-mRNA polyadenylation factor that directly interacts with
CC poly(A) polymerase. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the FIP1 family. {ECO:0000305}.
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DR EMBL; CR382139; CAG91117.2; -; Genomic_DNA.
DR RefSeq; XP_462602.2; XM_462602.1.
DR AlphaFoldDB; Q6BGR9; -.
DR SMR; Q6BGR9; -.
DR STRING; 4959.XP_462602.2; -.
DR EnsemblFungi; CAG91117; CAG91117; DEHA2G24398g.
DR GeneID; 2905564; -.
DR KEGG; dha:DEHA2G24398g; -.
DR VEuPathDB; FungiDB:DEHA2G24398g; -.
DR eggNOG; KOG1049; Eukaryota.
DR HOGENOM; CLU_039307_2_0_1; -.
DR InParanoid; Q6BGR9; -.
DR OMA; GFNEYTW; -.
DR OrthoDB; 1541076at2759; -.
DR Proteomes; UP000000599; Chromosome G.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR InterPro; IPR007854; Fip1_dom.
DR Pfam; PF05182; Fip1; 1.
PE 3: Inferred from homology;
KW mRNA processing; Nucleus; Reference proteome.
FT CHAIN 1..328
FT /note="Pre-mRNA polyadenylation factor FIP1"
FT /id="PRO_0000238511"
FT REGION 1..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 204..237
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..328
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..82
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 89..105
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..230
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 292..313
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..328
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 328 AA; 35685 MW; D63DF436630AE65A CRC64;
MAGKHSDDED AYLYGSDDDN DQPVSKKQKI TEQSDESQEK LSKTTAAKKS EVEEKDSLEN
SSNDEDDNDS EEDSDSDDDI EFVIGESAPK SGQTITTSGP QNDTIDAVTD MDAGGDKNAT
TTIVSNQADK GSSIDINSVA QLDGKPLTQV DLEKLKDKPW RFPGADISDY FNYGFDEFTW
TAYCCKQDKL RGEFNPQKLM AQLMSGGAGP PPMPSGKSGS NNTPTNKPTA MSPPMGMPPM
GMMPPGMPMM PGMPGMPGMP NMSNMPNMPN MPNMPNMPNM PNMPNMPNMN NMPNMPNMPN
MPNFMNNSRP GQVPNFGIPP PPPPQNRR