AKIR1_HUMAN
ID AKIR1_HUMAN Reviewed; 192 AA.
AC Q9H9L7; B4DZU6; Q0VDB3; Q53FK8;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=Akirin-1 {ECO:0000305};
GN Name=AKIRIN1 {ECO:0000303|PubMed:18066067, ECO:0000312|HGNC:HGNC:25744};
GN Synonyms=C1orf108 {ECO:0000312|HGNC:HGNC:25744};
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC TISSUE=Thymus;
RX PubMed=14702039; DOI=10.1038/ng1285;
RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA Isogai T., Sugano S.;
RT "Complete sequencing and characterization of 21,243 full-length human
RT cDNAs.";
RL Nat. Genet. 36:40-45(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16710414; DOI=10.1038/nature04727;
RA Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A.,
RA Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C.,
RA Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.,
RA Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C.,
RA Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W.,
RA Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J.,
RA Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J.,
RA Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y.,
RA Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J.,
RA Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H.,
RA Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L.,
RA Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J.,
RA Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S.,
RA Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K.,
RA Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R.,
RA Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M.,
RA Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S.,
RA Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J.,
RA Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W.,
RA McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N.,
RA Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V.,
RA Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J.,
RA Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E.,
RA Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S.,
RA Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M.,
RA White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H.,
RA Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E.,
RA Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G.,
RA Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.;
RT "The DNA sequence and biological annotation of human chromosome 1.";
RL Nature 441:315-321(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX PubMed=18066067; DOI=10.1038/ni1543;
RA Goto A., Matsushita K., Gesellchen V., El Chamy L., Kuttenkeuler D.,
RA Takeuchi O., Hoffmann J.A., Akira S., Boutros M., Reichhart J.-M.;
RT "Akirins are highly conserved nuclear proteins required for NF-kappaB-
RT dependent gene expression in Drosophila and mice.";
RL Nat. Immunol. 9:97-104(2008).
RN [5]
RP ERRATUM OF PUBMED:18066067.
RA Goto A., Matsushita K., Gesellchen V., El Chamy L., Kuttenkeuler D.,
RA Takeuchi O., Hoffmann J.A., Akira S., Boutros M., Reichhart J.-M.;
RL Nat. Immunol. 9:216-216(2008).
RN [6]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Cervix carcinoma;
RX PubMed=18669648; DOI=10.1073/pnas.0805139105;
RA Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
RA Elledge S.J., Gygi S.P.;
RT "A quantitative atlas of mitotic phosphorylation.";
RL Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
RN [7]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-22, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21406692; DOI=10.1126/scisignal.2001570;
RA Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T.,
RA Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.;
RT "System-wide temporal characterization of the proteome and phosphoproteome
RT of human embryonic stem cell differentiation.";
RL Sci. Signal. 4:RS3-RS3(2011).
RN [8]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-22 AND THR-72, AND
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Cervix carcinoma, and Erythroleukemia;
RX PubMed=23186163; DOI=10.1021/pr300630k;
RA Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA Mohammed S.;
RT "Toward a comprehensive characterization of a human cancer cell
RT phosphoproteome.";
RL J. Proteome Res. 12:260-271(2013).
RN [9]
RP FUNCTION.
RX PubMed=34711951; DOI=10.1038/s41586-021-04035-8;
RA de Almeida M., Hinterndorfer M., Brunner H., Grishkovskaya I., Singh K.,
RA Schleiffer A., Jude J., Deswal S., Kalis R., Vunjak M., Lendl T., Imre R.,
RA Roitinger E., Neumann T., Kandolf S., Schutzbier M., Mechtler K.,
RA Versteeg G.A., Haselbach D., Zuber J.;
RT "AKIRIN2 controls the nuclear import of proteasomes in vertebrates.";
RL Nature 599:491-496(2021).
CC -!- FUNCTION: Molecular adapter that acts as a bridge between proteins, and
CC which is involved skeletal muscle development (By similarity).
CC Functions as signal transducer for MSTN during skeletal muscle
CC regeneration and myogenesis (By similarity). May regulate chemotaxis of
CC both macrophages and myoblasts by reorganising actin cytoskeleton,
CC leading to more efficient lamellipodia formation via a PI3 kinase
CC dependent pathway (By similarity). In contrast to AKIRIN2, not involved
CC in nuclear import of proteasomes (PubMed:34711951).
CC {ECO:0000250|UniProtKB:Q99LF1, ECO:0000269|PubMed:34711951}.
CC -!- INTERACTION:
CC Q9H9L7; Q9HD26: GOPC; NbExp=3; IntAct=EBI-10309796, EBI-349832;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:18066067}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9H9L7-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9H9L7-2; Sequence=VSP_042769;
CC -!- TISSUE SPECIFICITY: Widely expressed with the highest expression in
CC heart, liver, placenta and peripheral blood leukocytes.
CC {ECO:0000269|PubMed:18066067}.
CC -!- MISCELLANEOUS: 'Akiraka ni suru' means 'making things clear' in
CC Japanese. The name is given based on the presence of the clear nuclear
CC localization signal. {ECO:0000305|PubMed:18066067}.
CC -!- SIMILARITY: Belongs to the akirin family.
CC {ECO:0000305|PubMed:18066067}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI19747.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AK022728; BAB14208.1; -; mRNA.
DR EMBL; AK223276; BAD96996.1; -; mRNA.
DR EMBL; AK303098; BAG64208.1; -; mRNA.
DR EMBL; AL606465; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC119745; AAI19746.1; -; mRNA.
DR EMBL; BC119746; AAI19747.1; ALT_INIT; mRNA.
DR CCDS; CCDS433.1; -. [Q9H9L7-1]
DR CCDS; CCDS44113.1; -. [Q9H9L7-2]
DR RefSeq; NP_001129747.1; NM_001136275.1. [Q9H9L7-2]
DR RefSeq; NP_078871.1; NM_024595.2. [Q9H9L7-1]
DR AlphaFoldDB; Q9H9L7; -.
DR SMR; Q9H9L7; -.
DR BioGRID; 122775; 17.
DR IntAct; Q9H9L7; 5.
DR STRING; 9606.ENSP00000392678; -.
DR iPTMnet; Q9H9L7; -.
DR PhosphoSitePlus; Q9H9L7; -.
DR BioMuta; AKIRIN1; -.
DR DMDM; 74752744; -.
DR EPD; Q9H9L7; -.
DR jPOST; Q9H9L7; -.
DR MassIVE; Q9H9L7; -.
DR MaxQB; Q9H9L7; -.
DR PaxDb; Q9H9L7; -.
DR PeptideAtlas; Q9H9L7; -.
DR PRIDE; Q9H9L7; -.
DR ProteomicsDB; 81331; -. [Q9H9L7-1]
DR ProteomicsDB; 81332; -. [Q9H9L7-2]
DR Antibodypedia; 31846; 134 antibodies from 21 providers.
DR DNASU; 79647; -.
DR Ensembl; ENST00000432648.8; ENSP00000392678.3; ENSG00000174574.16. [Q9H9L7-1]
DR Ensembl; ENST00000446189.6; ENSP00000389866.2; ENSG00000174574.16. [Q9H9L7-2]
DR GeneID; 79647; -.
DR KEGG; hsa:79647; -.
DR MANE-Select; ENST00000432648.8; ENSP00000392678.3; NM_024595.3; NP_078871.1.
DR UCSC; uc001ccw.4; human. [Q9H9L7-1]
DR CTD; 79647; -.
DR GeneCards; AKIRIN1; -.
DR HGNC; HGNC:25744; AKIRIN1.
DR HPA; ENSG00000174574; Low tissue specificity.
DR MIM; 615164; gene.
DR neXtProt; NX_Q9H9L7; -.
DR OpenTargets; ENSG00000174574; -.
DR PharmGKB; PA162376180; -.
DR VEuPathDB; HostDB:ENSG00000174574; -.
DR eggNOG; KOG4330; Eukaryota.
DR GeneTree; ENSGT00940000158787; -.
DR InParanoid; Q9H9L7; -.
DR OMA; TSESHPH; -.
DR OrthoDB; 1420469at2759; -.
DR PhylomeDB; Q9H9L7; -.
DR TreeFam; TF317123; -.
DR PathwayCommons; Q9H9L7; -.
DR SignaLink; Q9H9L7; -.
DR BioGRID-ORCS; 79647; 70 hits in 1080 CRISPR screens.
DR ChiTaRS; AKIRIN1; human.
DR GenomeRNAi; 79647; -.
DR Pharos; Q9H9L7; Tbio.
DR PRO; PR:Q9H9L7; -.
DR Proteomes; UP000005640; Chromosome 1.
DR RNAct; Q9H9L7; protein.
DR Bgee; ENSG00000174574; Expressed in sperm and 195 other tissues.
DR ExpressionAtlas; Q9H9L7; baseline and differential.
DR Genevisible; Q9H9L7; HS.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0031965; C:nuclear membrane; IDA:HPA.
DR GO; GO:0005654; C:nucleoplasm; IDA:HPA.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0014839; P:myoblast migration involved in skeletal muscle regeneration; ISS:UniProtKB.
DR GO; GO:1902725; P:negative regulation of satellite cell differentiation; ISS:UniProtKB.
DR GO; GO:1902723; P:negative regulation of skeletal muscle satellite cell proliferation; ISS:UniProtKB.
DR GO; GO:0010592; P:positive regulation of lamellipodium assembly; ISS:UniProtKB.
DR GO; GO:0010759; P:positive regulation of macrophage chemotaxis; ISS:UniProtKB.
DR GO; GO:0045663; P:positive regulation of myoblast differentiation; ISS:UniProtKB.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISS:UniProtKB.
DR InterPro; IPR024132; Akirin.
DR PANTHER; PTHR13293; PTHR13293; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Nucleus; Phosphoprotein; Reference proteome.
FT CHAIN 1..192
FT /note="Akirin-1"
FT /id="PRO_0000274318"
FT REGION 17..71
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 104..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 23..28
FT /note="Nuclear localization signal"
FT MOTIF 189..192
FT /note="SYVS motif"
FT /evidence="ECO:0000250|UniProtKB:Q53H80"
FT COMPBIAS 27..61
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 22
FT /note="Phosphoserine"
FT /evidence="ECO:0007744|PubMed:21406692,
FT ECO:0007744|PubMed:23186163"
FT MOD_RES 72
FT /note="Phosphothreonine"
FT /evidence="ECO:0007744|PubMed:23186163"
FT VAR_SEQ 121..165
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14702039"
FT /id="VSP_042769"
FT CONFLICT 39
FT /note="R -> G (in Ref. 1; BAD96996)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 192 AA; 21867 MW; 21D7B2E6E026A802 CRC64;
MACGATLKRP MEFEAALLSP GSPKRRRCAP LPGPTPGLRP PDAEPPPPFQ TQTPPQSLQQ
PAPPGSERRL PTPEQIFQNI KQEYSRYQRW RHLEVVLNQS EACASESQPH SSALTAPSSP
GSSWMKKDQP TFTLRQVGII CERLLKDYED KIREEYEQIL NTKLAEQYES FVKFTHDQIM
RRYGTRPTSY VS
