FIXK_RHIME
ID FIXK_RHIME Reviewed; 211 AA.
AC P13295;
DT 01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1990, sequence version 1.
DT 25-MAY-2022, entry version 130.
DE RecName: Full=Nitrogen fixation regulation protein FixK;
GN Name=fixK; OrderedLocusNames=RA0667; ORFNames=SMa1225;
OS Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium
OS meliloti).
OG Plasmid pSymA (megaplasmid 1).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=266834;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2663474; DOI=10.1002/j.1460-2075.1989.tb03502.x;
RA Batut J., Daveran-Mingot M.-L., David M., Jacobs J., Garnerone A.-M.,
RA Kahn D.;
RT "fixK, a gene homologous with fnr and crp from Escherichia coli, regulates
RT nitrogen fixation genes both positively and negatively in Rhizobium
RT meliloti.";
RL EMBO J. 8:1279-1286(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1021;
RX PubMed=11481432; DOI=10.1073/pnas.161294798;
RA Barnett M.J., Fisher R.F., Jones T., Komp C., Abola A.P., Barloy-Hubler F.,
RA Bowser L., Capela D., Galibert F., Gouzy J., Gurjal M., Hong A., Huizar L.,
RA Hyman R.W., Kahn D., Kahn M.L., Kalman S., Keating D.H., Palm C.,
RA Peck M.C., Surzycki R., Wells D.H., Yeh K.-C., Davis R.W., Federspiel N.A.,
RA Long S.R.;
RT "Nucleotide sequence and predicted functions of the entire Sinorhizobium
RT meliloti pSymA megaplasmid.";
RL Proc. Natl. Acad. Sci. U.S.A. 98:9883-9888(2001).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1021;
RX PubMed=11474104; DOI=10.1126/science.1060966;
RA Galibert F., Finan T.M., Long S.R., Puehler A., Abola P., Ampe F.,
RA Barloy-Hubler F., Barnett M.J., Becker A., Boistard P., Bothe G.,
RA Boutry M., Bowser L., Buhrmester J., Cadieu E., Capela D., Chain P.,
RA Cowie A., Davis R.W., Dreano S., Federspiel N.A., Fisher R.F., Gloux S.,
RA Godrie T., Goffeau A., Golding B., Gouzy J., Gurjal M., Hernandez-Lucas I.,
RA Hong A., Huizar L., Hyman R.W., Jones T., Kahn D., Kahn M.L., Kalman S.,
RA Keating D.H., Kiss E., Komp C., Lelaure V., Masuy D., Palm C., Peck M.C.,
RA Pohl T.M., Portetelle D., Purnelle B., Ramsperger U., Surzycki R.,
RA Thebault P., Vandenbol M., Vorhoelter F.J., Weidner S., Wells D.H.,
RA Wong K., Yeh K.-C., Batut J.;
RT "The composite genome of the legume symbiont Sinorhizobium meliloti.";
RL Science 293:668-672(2001).
CC -!- FUNCTION: FixK is a protein that regulates nitrogen fixation genes both
CC positively and negatively. FixK appears to repress its own expression
CC and that of nifA. FixK may bind DNA at the FNR consensus binding site.
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DR EMBL; X15079; CAA33183.1; -; Genomic_DNA.
DR EMBL; Z21854; CAA79899.1; -; Genomic_DNA.
DR EMBL; AE006469; AAK65325.1; -; Genomic_DNA.
DR PIR; C95345; C95345.
DR PIR; S04122; S04122.
DR RefSeq; NP_435913.1; NC_003037.1.
DR RefSeq; WP_010967646.1; NC_003037.1.
DR AlphaFoldDB; P13295; -.
DR SMR; P13295; -.
DR EnsemblBacteria; AAK65325; AAK65325; SMa1225.
DR GeneID; 61599435; -.
DR KEGG; sme:SMa1225; -.
DR PATRIC; fig|266834.11.peg.687; -.
DR HOGENOM; CLU_075053_0_1_5; -.
DR OMA; QARDHMV; -.
DR Proteomes; UP000001976; Plasmid pSymA.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0009399; P:nitrogen fixation; IEA:UniProtKB-KW.
DR CDD; cd00038; CAP_ED; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 2.60.120.10; -; 1.
DR InterPro; IPR018490; cNMP-bd-like.
DR InterPro; IPR000595; cNMP-bd_dom.
DR InterPro; IPR012318; HTH_CRP.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR018335; Tscrpt_reg_HTH_Crp-type_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF00027; cNMP_binding; 1.
DR Pfam; PF13545; HTH_Crp_2; 1.
DR PRINTS; PR00034; HTHCRP.
DR SMART; SM00100; cNMP; 1.
DR SMART; SM00419; HTH_CRP; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR SUPFAM; SSF51206; SSF51206; 1.
DR PROSITE; PS50042; CNMP_BINDING_3; 1.
DR PROSITE; PS00042; HTH_CRP_1; 1.
DR PROSITE; PS51063; HTH_CRP_2; 1.
PE 4: Predicted;
KW Activator; DNA-binding; Nitrogen fixation; Plasmid; Reference proteome;
KW Repressor; Transcription; Transcription regulation.
FT CHAIN 1..211
FT /note="Nitrogen fixation regulation protein FixK"
FT /id="PRO_0000100158"
FT DOMAIN 134..204
FT /note="HTH crp-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00387"
FT DNA_BIND 163..182
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00387"
SQ SEQUENCE 211 AA; 23478 MW; 20357EE9974559EC CRC64;
MYAAAQAKPQ SIEVEHLGPA PMSGPRLVAT YKPGREIYAQ GDLNDKCYQV STGAVRIYRL
LSDGRRQVVS FHLPGEMFGF EAGSNHSFFA EAITETTLAI FGRRNMQERS RELLALALTG
MARAQQHLLV IGRQCAVERI AAFLVDLCER QGGGRQLRLP MSRQDIADYL GLTIETVSRV
VTKLKERSLI ALRDARTIDI MKPEALRSLC N