FK113_ARATH
ID FK113_ARATH Reviewed; 413 AA.
AC Q6NPN5; O04638; Q67ZX2;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=F-box/kelch-repeat protein At5g26960;
GN OrderedLocusNames=At5g26960; ORFNames=F2P16.220;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Carninci P., Hayashizaki Y.,
RA Ishida J., Kamiya A., Kawai J., Narusaka M., Sakurai T., Satou M., Seki M.,
RA Shinozaki K., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2-413.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB61064.1; Type=Erroneous gene model prediction; Note=The predicted gene At5g26950 has been split into 2 genes: At5g26950 and At5g26960.; Evidence={ECO:0000305};
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DR EMBL; AF007270; AAB61064.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED93634.1; -; Genomic_DNA.
DR EMBL; BT010884; AAR24662.1; -; mRNA.
DR EMBL; AK175995; BAD43758.1; -; mRNA.
DR PIR; T01772; T01772.
DR RefSeq; NP_198048.1; NM_122578.4.
DR AlphaFoldDB; Q6NPN5; -.
DR SMR; Q6NPN5; -.
DR BioGRID; 18029; 1.
DR PaxDb; Q6NPN5; -.
DR PRIDE; Q6NPN5; -.
DR EnsemblPlants; AT5G26960.1; AT5G26960.1; AT5G26960.
DR GeneID; 832754; -.
DR Gramene; AT5G26960.1; AT5G26960.1; AT5G26960.
DR KEGG; ath:AT5G26960; -.
DR Araport; AT5G26960; -.
DR TAIR; locus:2148483; AT5G26960.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_056077_0_0_1; -.
DR InParanoid; Q6NPN5; -.
DR OMA; VFPRKKF; -.
DR OrthoDB; 1233567at2759; -.
DR PhylomeDB; Q6NPN5; -.
DR PRO; PR:Q6NPN5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q6NPN5; baseline and differential.
DR Genevisible; Q6NPN5; AT.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF01344; Kelch_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00612; Kelch; 2.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..413
FT /note="F-box/kelch-repeat protein At5g26960"
FT /id="PRO_0000274965"
FT DOMAIN 41..90
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REPEAT 96..141
FT /note="Kelch 1"
FT REPEAT 152..191
FT /note="Kelch 2"
FT REPEAT 192..238
FT /note="Kelch 3"
FT REPEAT 240..295
FT /note="Kelch 4"
FT REPEAT 367..413
FT /note="Kelch 5"
SQ SEQUENCE 413 AA; 45013 MW; 050E7BFA46A5E1C7 CRC64;
MSENCNSRHF SWLMKSCLPN PSDAKSLVQI HQPSSTAANS SATIASLPDD LLLECISRVP
SSSIPSLAVV CRRWSRLLHS PYFLHLRRRL GLLRHSLFAI STVDSGLFAA DLQFQSEIAS
WKVSLAVSSR SVGVDGSYGS LSHARAAAIG PRVYVVSRNA VLRYDSWMGT LNLRSPMIFP
RKKFAIAVVS GKIYVAGGGG GSEVAAAVEE YDPELNRWEV VTQSARKRYG CIGAAVDGVF
YVIGGLKIGN ETSRAVAARA YASSMDLFDV ESRQWLRSRS VPGGGCVVAA CAAVGYVYVL
TSHAVELSFW RFDARRRGGN SGFGEWQRLK SPPLPAQVRL DGTVRFSCVG VEDKVAVVQV
VGCIDDLLRR SGRGERGIRE SLVLLYDTTE GEWRRAADLP EMITRAACAC VEW
