FK130_ARATH
ID FK130_ARATH Reviewed; 291 AA.
AC Q9FFV5; Q1PDQ6;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=F-box/kelch-repeat protein At5g38670;
GN OrderedLocusNames=At5g38670; ORFNames=MBB18.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9FFV5-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9FFV5-2; Sequence=VSP_039577, VSP_039578;
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DR EMBL; AB005231; BAB10157.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94348.1; -; Genomic_DNA.
DR EMBL; DQ447012; ABE66200.1; -; mRNA.
DR RefSeq; NP_198683.1; NM_123228.1. [Q9FFV5-1]
DR AlphaFoldDB; Q9FFV5; -.
DR SMR; Q9FFV5; -.
DR PaxDb; Q9FFV5; -.
DR PRIDE; Q9FFV5; -.
DR EnsemblPlants; AT5G38670.1; AT5G38670.1; AT5G38670. [Q9FFV5-1]
DR GeneID; 833857; -.
DR Gramene; AT5G38670.1; AT5G38670.1; AT5G38670. [Q9FFV5-1]
DR KEGG; ath:AT5G38670; -.
DR Araport; AT5G38670; -.
DR TAIR; locus:2159893; AT5G38670.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_032521_1_2_1; -.
DR InParanoid; Q9FFV5; -.
DR OMA; RVKLMSC; -.
DR PhylomeDB; Q9FFV5; -.
DR PRO; PR:Q9FFV5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FFV5; differential.
DR Genevisible; Q9FFV5; AT.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR011498; Kelch_2.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07646; Kelch_2; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..291
FT /note="F-box/kelch-repeat protein At5g38670"
FT /id="PRO_0000396072"
FT DOMAIN 5..51
FT /note="F-box"
FT REPEAT 46..91
FT /note="Kelch 1"
FT REPEAT 92..140
FT /note="Kelch 2"
FT REPEAT 142..187
FT /note="Kelch 3"
FT REPEAT 189..232
FT /note="Kelch 4"
FT VAR_SEQ 1..81
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:17147637"
FT /id="VSP_039577"
FT VAR_SEQ 149..180
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:17147637"
FT /id="VSP_039578"
SQ SEQUENCE 291 AA; 33832 MW; 095E7A03CCF5FD81 CRC64;
MQSQTNPNPS LPDDLILSCV ARVSRLYYPA LSLVSKSFRS LIASPELYKT RSLLDRTESC
LYILYCTSNT WHEGPRLRVK LMSCTACVLD EKIYVSGRCK DGDSMTFQVF DTNTQTWDPL
SVPCSETKHD FHYKIVRFDG KLHLVSYKGV DAYNSKEGRW DLVTPSIEHN KYLYDCYRNI
GNVWYTIVKG DISTSVWWYH SEEREWRDLK GMVGLPKFPI DACLRMVDYG GKMAVLWDDY
LPGRRKKMIW CAEIALERRG SLEIWGKVEW FAHVLTVPRQ YEFVKVLAAT L